Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01322 ATGGTTTTCCCTAAACCACCTTCTGAATCTGATCTCTTTTTTCACTCTAACTTAGCTTCTCGCTATGCCAGGGATTCTCTTCCAAGGTTTAGCATGCCGGAGAACTCGATGCCGAAGGAGGCGGCGTACCAAAACATACATGATGAGCTGCAGCTCGATGGGAATCCGAAGCTGAACTTGGCTTCCTTTGTGACCACTGCCATGGAGGAAGAATGCAACAAGCTCATCATGGAATCCATCAACAAGAACTATGTTGACATGGATGAATACCCAGTTACCACTGAGCTTCACAACCGGTGCGTGAACATGATAGGGCGTCTGTTCAATGCTCCTATCGGAGAAGGTGAAGCTGCAACCGGAGTCGGAACGGTTGGGTCATCGGAGGCTATAATGCTTGCTGGTCTTGCATTCAAGAAGAGGTGGCAGAACAAAAGGAAAGCTCAGGACAAGCCCTATGACAAACCTAACATTGTCACCGGTGCCAATGTGCAGGTTTGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAAGGAAGTCAAAGTGAGGGAAGGATACTATGTGATGGACCCTGCCAAAGCTGTTGAAATGGTGGATGAGAACACCATTTGTGTAGCTGCAATCCTAGGCTCAACTTATAATGGAGAATTTGAAGATGTCAAGCTCTTAAATGACCTTCTCCTAGAGAAGAACAAGCAAACTGGATGGGATACACCTATTCATGTTGATGCTGCTAGTGGTGGCTTTATTGCTCCTTTCCTTTACCCAGAACTTGAATGGGATTTCAGGCTTCCATTAGTGAAGAGCATCAATGTTAGTGGCCACAAGTATGGTCTAGTTTATGCTGGAATTGGCTGGGTTCTCTGGAGGACTAAGGAGGATTTGCCTGAGGATCTTGTCTTTCATATCAATTACCTTGGTGCTGACCAGCCCACCTTTACCCTCAATTTCTCCAAAGGTTCTAGCCAGATTATTGCTCAATATTATCAGTTAATTCGCCTAGGTCAAGAGGGTTACCGAAGTATAATGGAAAACTGTAGAGACAATGCCATGGTGATAAAGAAAGGATTGGAGAAAACTGGATGCTTTAACATACTCTCAAAAGACAATGGGGTTCCTGTGGTAGCCTTTTCTCTCAAGAACACAAGCAAGCACAACGAGTATGAAATATCAGAGAAGCTTCGCCGCCATGGCTGGATCGTTCCGGCATATCCGATGCCGCCGGCAGCTCAACACATCACGGTGCTCCGAGTTGTCATTAGAGCTGAGTTTTCTCGCACTCTCGCGGAACGCCTCGTGCTTGACATAGAAAATGTGTTGCGTGAGCTTGATCTTCCCCCTAAGCACACTACCAAAGTGACTAGTGAtattaagaaagagaaggcAGTGGATGACACTGTTGGGATCAAGAGGACTGCTTTAGATGCACGAAGAGAAATTATTGCCCAAGAAGCCATCAAGAGGCAGAAAATCTTGGCAGCCTA 1487 0.4546 MVFPKPPSESDLFFHSNLASRYARDSLPRFSMPENSMPKEAAYQNIHDELQLDGNPKLNLASFVTTAMEEECNKLIMESINKNYVDMDEYPVTTELHNRCVNMIGRLFNAPIGEGEAATGVGTVGSSEAIMLAGLAFKKRWQNKRKAQDKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRDNAMVIKKGLEKTGCFNILSKDNGVPVVAFSLKNTSKHNEYEISEKLRRHGWIVPAYPMPPAAQHITVLRVVIRAEFSRTLAERLVLDIENVLRELDLPPKHTTKVTSDIKKEKAVDDTVGIKRTALDARREIIAQEAIKRQKILAA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01322 495 Gene3D - 361 447 - -
Bva01g01322 495 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva01g01322 495 PANTHER GLUTAMATE DECARBOXYLASE 1 494 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva01g01322 495 Gene3D - 66 360 IPR015421 GO:0003824
Bva01g01322 495 PANTHER GLUTAMATE DECARBOXYLASE 1 494 - -
Bva01g01322 495 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 17 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva01g01322 495 CDD DOPA_deC_like 59 438 - -
Bva01g01322 495 Gene3D - 1 65 - -
Bva01g01322 495 SUPERFAMILY PLP-dependent transferases 18 444 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01322 Bva-Chr1 14401172 14404747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01322 1 483 Calmodulin-binding Proteins AT2G02010 78.054 0.0 795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01322 01 14401172 14404747 Bva01g01322 01 14401172 14404747 ECH