LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva01g01317	ATGGGTTCCATTGAGGATGAAAGATCGCTTGTGGAAGAGGGTCTTCTTCAGGATGAAAGGAGCAAACAATACACAGGAGATGGCTCAGTTGACTGTCGAGGGAATCCAGTTCTCAAACATAATACTGGCAACTGGAGAGCTTGTCCATTTATTTTAGGTGATGAGTGTTGTGAACGTTTGGCTTACTATGGCATTGCTAAGAATCTTGTCACCTATCTGACAAGGAAATTGCATGAAGGAAATGTCTCTGCCGCAAGAAATGTCACCACCTGGCAAGGCACTTGTTATCTTACACCTCTCATTGGAGCTGTCTTAGCAGATGCTTATTGGGGAAGATACTGGACAATTGCTGTTTTCTCCATGATATATTTCATTGGAATGTGTACACTGTCTATTTCTGCATCCGTTCCTGCTTTGCAGCCTGCTGTATGTGTGGGGTCCATATGCCCTTCAGCTACTCCTGTACAAAATGCTGTGTTTTTCTCTGGTCTCTACTTGATTGCACTAGGAACTGGTGGAATAAAGCCTTGTGTCTCATCTTTTGGGGCTGATCAGTTTGATGATACTGATCCCCAGGAACGGATTAAGAAGGGATCCTTTTTCAACTGGTTTTACTTTTCTATCAACATAGGTTCTCTGGTATCAAGCAGTTTAATTGTTTGGATTCAAGACAACAAAGGATGGGGTCTTGGATTTGGCATTCCTGCTTTTTTCATGGGCTTAtctgttattattttctttctgggCACACCCCTGTACAGGTTCCAAAAACCAGGGGGAAGCCCCATTACAAGAATGTGCCAGGTTGTGGTAGCATCTTTCCGAAAGCGGAGTCTGCATGTCCCTAAGGATAGTAGTCTTCTGTATGAGACACCAGACAAGAGCTCTGCAATTGAAGGAAGTAGGAAGCTGGAGCACACTTTTGAATTGACGTATCTTGATAAAGCAGCTGTGGTGTCTGATGTGGAGAGCAAAACTGGTGACTATTCCAATCCATGGAGAATATGCACTGTGACCCAGCTTCTTGAATATGTCGGTGTACATTGTCTGTGCCAAAAGCTTCACTGCAGAGAATATGATATGGACTATTTGGAGGAACCCAGATCACCTTTGGAAGATGGTCTTTTTGCGGGTTCAACCCACTTTTTCTGCTGGTTATTTCAATATTGTTTATTGTATAATGAAGACCATTTTTACACAGGAGATTGGTCAGTTAACAaatttgagataaaatgtgggacaaaagattttattttgagaaaacttGCCCTTGAGAGGAGAACTGGAAAGTGGGAAGCTTTTGCCCCCTTCATTCTTGGTGTTTGTTTTTGTGACTGTTTGTCTTATCATGGTATTTCCAGTAACCTTGTTACTTATCTTAAGGAGAAACCGCATGAAGGAACTGCCTCTGCTGCAATAAATGTTACCACTTCCCAAGGCACTTGCTGTATTACGCCCTCATTTGGGCCTTTATTGCTGATGCATTCTGGGGAAGATAAAGAACAATTGCTGCCTTCTGCATA	1523	0.4117	MGSIEDERSLVEEGLLQDERSKQYTGDGSVDCRGNPVLKHNTGNWRACPFILGDECCERLAYYGIAKNLVTYLTRKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAVFSMIYFIGMCTLSISASVPALQPAVCVGSICPSATPVQNAVFFSGLYLIALGTGGIKPCVSSFGADQFDDTDPQERIKKGSFFNWFYFSINIGSLVSSSLIVWIQDNKGWGLGFGIPAFFMGLSVIIFFLGTPLYRFQKPGGSPITRMCQVVVASFRKRSLHVPKDSSLLYETPDKSSAIEGSRKLEHTFELTYLDKAAVVSDVESKTGDYSNPWRICTVTQLLEYVGVHCLCQKLHCREYDMDYLEEPRSPLEDGLFAGSTHFFCWLFQYCLLYNEDHFYTGDWSVNKFEIKCGTKDFILRKLALERRTGKWEAFAPFILGVCFCDCLSYHGISSNLVTYLKEKPHEGTASAAINVTTSQGTCCITPSFGPLLLMHSGEDKEQLLPSA	507

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva01g01317	507	ProSitePatterns	PTR2 family proton/oligopeptide symporters signature 1.	102	126	IPR018456	GO:0006857\|GO:0016020\|GO:0022857
	Bva01g01317	507	Gene3D	MFS general substrate transporter like domains	410	493	IPR036259	-
	Bva01g01317	507	SUPERFAMILY	MFS general substrate transporter	36	472	IPR036259	-
	Bva01g01317	507	ProSitePatterns	PTR2 family proton/oligopeptide symporters signature 2.	201	213	IPR018456	GO:0006857\|GO:0016020\|GO:0022857
	Bva01g01317	507	PANTHER	OLIGOPEPTIDE TRANSPORTER-RELATED	419	492	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Bva01g01317	507	PANTHER	OLIGOPEPTIDE TRANSPORTER-RELATED	24	343	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Bva01g01317	507	PANTHER	BNAC09G20910D PROTEIN	419	492	-	-
	Bva01g01317	507	PANTHER	BNAC09G20910D PROTEIN	24	343	-	-
	Bva01g01317	507	Gene3D	MFS general substrate transporter like domains	16	351	IPR036259	-
	Bva01g01317	507	Pfam	POT family	113	340	IPR000109	GO:0016020\|GO:0022857\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva01g01317	Bva-Chr1	14280407	14286569	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva01g01317	365	492	Organic Solute Cotransporters	AT2G02040	40.625	1.01e-15	78.2

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva01g01317	01	14280407	14286569	Bva01g01317	01	14280407	14286569	ECH