Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00939 ATGTCTCGGCAAACAACGTCGACCGCCTTTACCAAATCGAAGACTCTCGACAATAAATATATGCTTGGAGATGAGATAGGAAAAGGAGCATATGGTAGAGTTTACAAAGGATTGGACCTAGAGAATGGAGATTTTGTTGCAATTAAACAGGTTTCCTTGGAGAATATTGCTCAAGAGGATCTCAACATCATCATGCAAGAGATCGATTTACTGAAGAATTTAAACCACAAAAACATTGTAAAATATCTTGGATCCTTAAAGACAAAGACTCACCTGCACATAATTCTTGAATATGTGGAGAATGGTTCACTTGCAAATATTATCAAGCCAAATAAGTTTGGACCATTTCCGGAATCTTTAGTTGCTGTCTATATTGCCCAGGTATTAGAAGGCTTGGTTTATCTCCATGAACAGGGTGTAATTCATCGGGACATTAAGGGTGCAAATATATTGACAACCAAAGAGGGCCTTGTTAAACTCGCAGATTTTGGTGTTGCCACAAAATTGACAGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACTCCATATTGGATGGCACCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACTGTTATTGAACTTCTTACATGTTTACCTCCATATTATGATCTGCAACCCATGCCAGCTCTCTTCCGTATAGTTCAGGATGAGCATCCTCCACTACCTGATAGCCTGTCTCCTGACATCACAGATTTTCTGCGTCAATGCTTTAAGAAGGATGCTAGACAGAGACCTGATGCGAAAGCACTGCTGTCTCACCCTTGGATAACAAATTGTAGACGAGCTCTACAATCTTCTCTTCGTCATAGTGGAACATTAAGAAATATAGAGGAAGATGATTCAGTGGATGCAGAAGTTTCTCGTCGTGGCAATAAGAGTGCTGGTGAAAGAACTTCTGAGAAAGCAATGGTGGAATCTGCAAAAGGGTTATTAACTGAGGCTGCTGATGACATTAAGCATGACGAAGACAATGCTTCTGATTCTAACTTTGGCAATGAAAGAATGGAGAAGGCAGATGATGTTTTGTCAGATCAGGTTCTTACCTTAGCCATTCATGAGAAGTCATCTCTTCAAACGGGCTCTACCCAACTCTCTTCTAATAGAGAAGTGGCTAGTTCTGAGCCAACTGGTGATCATGTTACATCAAATAATAAAGACCATGGTGAAGTCATGATGAATGGAGAAGTGGGATCACCAAATTCAAGAGGGATAGCTGGAAATCTTGGAGGAAAAGGAAGTTCGATCAATAATGGCAATAAATCATTTAGTTTTGGGCCACAAGTTCAAGATAATGGTTCTCTGAAGGCTATGAAGATGCCACCCTCAGTGGAAGGAAATGGGTTGAGTAGATTTAGTGACCCTCCAGGAGATGCTTCCTTAGATGATTTATTTCATCCTCTAGATAAACACCCTGGGGAGTCAGCAGCTGAGGCTTCCACATCTGCATCCACATCACATATTAATAAAGGTAATGCATCTATGCATAATGGTGGGAAGAATGACCTTGCCAAAGAGTTGAGGGCTACAATTGCTCGTAAACAGTGGGAGAAGGAGAGTGAAATTGGACAGCCAAACACTGGTGGAAACCTTTTACGCCTGATGATGGGAGTTCTAAAAGATGATGGAATTGATATTGATAGTCTGGTCTTTGATGATAAACTGCCTGGAGAAAATCTTTTCCCTCTACAGGCTGTTGAGTTCAGCAAATTGGTTGGGTCATTAAAACCAGAGGAACCAGAAGATGTGATTGTAGCTGCATGTAAGAAACTTATTGCTATCTTTCACCAACGTCCAGAGCAGAAGATTGTTTTTATTACCCAGCATGGCTTACTTCCTCTAACCGAGTTGCTAGAAGTTCCTAAAACTCATGTTATATGTTCTGTGCTTCAgcttataaatcaaataatcaaagatAACACTGATTTCCAAGAAAACGCCTGTCTTGTTGGATTGATTCCTACAGTAATGAGCTTCGCTGTTGCTGATCGTCCAAGAGAGGTTCGCATGGAAGCAGCTTATTTCTTGCAACAGCTTTGTCAGTCAAGCTCTTTGACACTACAAATGTTCATTGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTAGAGGCTGATTATGCCAAGTACAGGGAGATGGTTCATCTTGCTATTGACGGCATGTGGCAGGTCTTTAAGCTTCAGCGGGCAACCCCAAGAAATGATTTTTGTCGCATAGCTGCAAAGAATGGAATACTCTTTAGGCTTATAAACACCCTTTATAGCTTAAATGAGGCCACTCGATTAGCCTCTATGGGGGGTGGATTTCCAGTTGATGGTATAGCCCAGCGACCGCTTTCTGGCTCCTTGGATTCTGTACATCCTCTTTTTCAGAATGAGGCAATATTATCTCCAGCAGATCAGAGGCATGGAATGCTTGATCTCCACTTGGAACCTTCACGTGCCTCAACCTCCCATCCTCGGCGATCAGATGCCAATTACTCTGTTGATGCTGATAGGCCACAATCTAGCAATGCAGCAGCAGAAGCTCCATCTCTAGTATCCAGGGAATCTTCAGCTGGTGCATCAAAAGAGCGAGAGGGTATCAATAATGCTGCTAACAGGGCATCAACGGATAGACCTCCGAAATTGGCAGAAGCTGGATCAAATGGATTGGTAACTGGAACTACACTGCAAGAGCATAGGCCTCTTCTTAGCTTGTTGGACAAAGAGCCTCCATCTCGACATTTCTCTGGTCAGCTAGATTATGTCCGCCAGTTATCAGGATTAGAGAGACATGAAAGTGTACTCCCTCTCTTACATGCgtctgaaaagaaaacaaatggtGAACTAGACTTTTTGATGGCAGAGTTTGCAGATGTTTCTCAACGCGGAAGAGAAAATGGACATCTTGATTCTAGTGCTAGAGTGTCTAACAAAGCTGttccaaaaaaattaggaCCTTTAACCTCTAACGAAGTAGCTGCTTCTGCATCAGGGATTGTATCTCAGACTGCATCTGGCGTGCTATCTGGTTCAGGTGTCCTAAATGCTCGACCGGGTAGTGCAACTTCATCTGGGCTACTTTCCCACATGGTTTCATCATTGAATGCAGATGTTGCAAGGGAGTACCTAGAAAAGGTGGCTGATCTTCTGCTTGAGTTTGCTCAGGCAGATACTACAGTAAAGTCTTATATGTGCAGCCAAAGTTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTGCTATCCTGTTGAAGATACTCAAATGCATTAACCATCTCTCAACTGATCCAAATTGCTTAGAGAATCTTCAGCGAGCCGACGCAATAAAATACTTGATACCAAATCTTGAACTCAAAGAAGGGTCTCTTGTATCACAAATACATAATGAGGTATTGAATGCGCTATTCAATTTATGCAAGATAAATAAGCGGAGACAAGAACAAGCTGCTGAAAATGGGATCATTCCTCATTTGATGCAATTCATCACATCTAATTCTCCCTTGAAACAATATGCATTACCTCTATTATGTGACATGGCTCATGCGTCTCGTAATTCAAGAGAACAGTTAAGGGCCCATGGTGGTTTGGATGTATACTTGAGCCTCCTAGAGGATGAGTTTTGGTCAGTGACAGCATTGGATTCTATAGCTGTTTGCTTAGCTCATGACAACGACAACAGAAAGGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTGAAGTTCTTCCAGTGCTGTCCAGAGCAGTATTTTGTGCACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGCACGGATTAATACTACACTAGCTGTTAATGGACTAACTCCATTGCTAATCACAAGGCTTGACCATCAGGATGCTATTGCTCGTCTTAATTTACTCAAGCTAATAAAGGCTGTTTATGAGCACCATCCCCAGCCTAAGAAGTTGATAGTGGAGAATGATCTACCTCAGAAGCTTCAGAACTTAATAGAAGAAAGGAGAGATGGACAAAGCTCAGGTGGCCAAGTTTTGGTCAAACAGATGGCTACATCGTTACTCAAAGCTCTACATATAAACACCGTTTTGTA 4130 0.415 MSRQTTSTAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCLPPYYDLQPMPALFRIVQDEHPPLPDSLSPDITDFLRQCFKKDARQRPDAKALLSHPWITNCRRALQSSLRHSGTLRNIEEDDSVDAEVSRRGNKSAGERTSEKAMVESAKGLLTEAADDIKHDEDNASDSNFGNERMEKADDVLSDQVLTLAIHEKSSLQTGSTQLSSNREVASSEPTGDHVTSNNKDHGEVMMNGEVGSPNSRGIAGNLGGKGSSINNGNKSFSFGPQVQDNGSLKAMKMPPSVEGNGLSRFSDPPGDASLDDLFHPLDKHPGESAAEASTSASTSHINKGNASMHNGGKNDLAKELRATIARKQWEKESEIGQPNTGGNLLRLMMGVLKDDGIDIDSLVFDDKLPGENLFPLQAVEFSKLVGSLKPEEPEDVIVAACKKLIAIFHQRPEQKIVFITQHGLLPLTELLEVPKTHVICSVLQLINQIIKDNTDFQENACLVGLIPTVMSFAVADRPREVRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQRATPRNDFCRIAAKNGILFRLINTLYSLNEATRLASMGGGFPVDGIAQRPLSGSLDSVHPLFQNEAILSPADQRHGMLDLHLEPSRASTSHPRRSDANYSVDADRPQSSNAAAEAPSLVSRESSAGASKEREGINNAANRASTDRPPKLAEAGSNGLVTGTTLQEHRPLLSLLDKEPPSRHFSGQLDYVRQLSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGHLDSSARVSNKAVPKKLGPLTSNEVAASASGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPAILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHNEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDEFWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQYFVHILEPFLKIITKSARINTTLAVNGLTPLLITRLDHQDAIARLNLLKLIKAVYEHHPQPKKLIVENDLPQKLQNLIEERRDGQSSGGQVLVKQMATSLLKALHINTVL 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00939 1376 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Bva01g00939 1376 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Bva01g00939 1376 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Bva01g00939 1376 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Bva01g00939 1376 MobiDBLite consensus disorder prediction 828 906 - -
Bva01g00939 1376 MobiDBLite consensus disorder prediction 428 448 - -
Bva01g00939 1376 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00939 1376 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1165 1332 - -
Bva01g00939 1376 Gene3D - 576 784 IPR011989 -
Bva01g00939 1376 PANTHER MAP KINASE KINASE KINASE 2 843 - -
Bva01g00939 1376 MobiDBLite consensus disorder prediction 494 513 - -
Bva01g00939 1376 PANTHER MAP KINASE KINASE KINASE 1165 1332 - -
Bva01g00939 1376 MobiDBLite consensus disorder prediction 374 404 - -
Bva01g00939 1376 SMART arm_5 1110 1154 IPR000225 GO:0005515
Bva01g00939 1376 SMART arm_5 1156 1195 IPR000225 GO:0005515
Bva01g00939 1376 SMART arm_5 615 655 IPR000225 GO:0005515
Bva01g00939 1376 MobiDBLite consensus disorder prediction 836 869 - -
Bva01g00939 1376 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 843 - -
Bva01g00939 1376 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Bva01g00939 1376 SUPERFAMILY ARM repeat 587 1261 IPR016024 -
Bva01g00939 1376 CDD STKc_Cdc7_like 19 274 - -
Bva01g00939 1376 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00939 1376 Gene3D Transferase(Phosphotransferase) domain 1 17 310 - -
Bva01g00939 1376 MobiDBLite consensus disorder prediction 374 397 - -
Bva01g00939 1376 MobiDBLite consensus disorder prediction 297 353 - -
Bva01g00939 1376 Gene3D - 1025 1372 IPR011989 -
Bva01g00939 1376 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00939 1376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Bva01g00939 1376 MobiDBLite consensus disorder prediction 330 353 - -
Bva01g00939 1376 MobiDBLite consensus disorder prediction 420 518 - -
Bva01g00939 1376 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Bva01g00939 1376 MobiDBLite consensus disorder prediction 297 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00939 Bva-Chr1 7199167 7216641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00939 1 1376 MAP Kinase Kinase Kinase AT3G13530 73.033 0.0 1996
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Bva01g00939 Pkinase 1.4e-72 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00939 01 7199167 7216641 Bva01g00939 01 7199167 7216641 ECH