Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00928 ATGTACTTTAGAAGAATACAGTGCAGAGATCGAAGATGGGGTTTAGTATTTCAGCCATCCAAATACTTCATTAGGCCAAGATGCAATAACCATGCATGCTCTCAATCATTGTGCCATGAGATGACCGTGGAAGAACATTCTTCACATGATGGTGTCATCAGAAGGAATTTATTaggtttattttcttctaggGGTTTATCTAGTAATAGTTATACTGTGCTGCAAGGTCCGCCTGCTTTATGTTTGAAAAGTACCCAGTTTCGTGTCTATAGTTCTGAAAGTGATGGAAGGAATGCAAGTGAGGATAAACATGTGCATATAAATGATGGAGCTAACCTTGATAAGGGAAAGGATCGGcaagagaagtttgggaaagATGTCAACAACTGTAATGGGCATGCAAGACTTGGAGAACAGGATCAAGAGGAATGGCTTAAAAATGAGAAGCTTGCTGTAGAGTTTAAAAAGAACCAATCACCCTTTTTGACAAGGAGGGAGAAGTTCAAAAATGAGTTTCTGCGAAGGGTTGTTCCATGGgagaaaataaacatttcATTGGACACATTTCCTTACTACATACATGAGCCTACAAAAACCCTTTTGGTGGAATGTGCTGCTTCTCATCTGAGACATAAAGATCTTGCTTTGTCTTATGGTGCTCGTCTTGCATCGTCAAGTGCAAGAATATTACTTCAGGGAATACCTGGCACTGAGCTTTATCGGGAGAGATTAATTAGAGCACTTGCACGAGATTTACAAGTTCCTTTGTTGGTGCTTGATAGCAGTGTACTTGCTCCTTATGGTGTTGATGATGATTTATCGACAGACAGTGAATctgatgatgaaaatgcagAGTCAGGGGAGGAAGATTCTTTGGAGTCTGAGGATGAGCATAATGATGCTAGCAATGAAGAAGAATGGACTAGTAGTACTGAGGCAAAGTCAGATGCTAGTGATAATGAAGATCTTGATACACTGGCAAGCACTGAGGCAGCCCTTAAGAAGGTTAAAGAAGCTGTTCAGAAGCTTGTTCCCTATGCCACTATTGCAGACTTTGAAAAGGTAGCATCTGTGGAATCTGAAAGTTCGGAGTCACACAGGTCACAGAATGTCAAGGATTCTGAGAAATCAGGATGCCAGCTAAAGAAAGGTGACCGTGTAAGATACATTGGGCCATCTGTTCAAGCGGAAGACCGTAATAGGGCTTTGTCAAAGGGTCAGAGGGGAGAGGTATATGAGGTAAATGGTGATCAGGTTGCTGTCCTCTTGGATGTCAGTGAAGATCATGCGAATGAAGCTGGGGTCCAGGAAATTaatgagaaagaaacagaACTACCAATATGTTGGATACATGCTAAGAACATTGAACAAGACCCTGATGCTCAAGTACAAGATTGCTATATTGCAATAGAGGCTCTGTGTGAGgTTTTGCGTTCCAAACAGCCCCTTATTGTCTATTTTCCAGATAGTTCACGGTGGCTGCATAGATTAGTTCCGAAGTCAAACCGAAGTGAGTTTGTTCAGAAGGTTGAAGAAATGTTTGACAAGTTATCTGACCCTGTTGTGTTTATTTGTGGGCAAAACAAAGTTCAGTCAGAATCAAAGGAGAGTGGAAAATTTACCATGATACTTCCAAGCTTTGGACGTGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTTGACTGAGGGACttaaagcaacaaaaagaTCTGATGATACTGAAATTTACAAACTTTTCACTaatgttttatgtttatatcCACCCAAGGAGGAGGATCTGCTTACAACTTTCAATAAACAACTAGAAGAAGACAGgagaattattatttcacGTAGTAATTTAAATGAACTACATAAGGTTCTCCAGGAACATGGGTTATCATGCTTGAACCTGTTGCATGTAAATACTGATGGTGTCATTTTGACTAAGCAAAAAGTTGAAAAAGTAGTGGGCTGGGCAAAGAATCATTACTTGTCATCTTGCTCTCGTCCTCTTGTTAAAGGAGAACAACTGTACCTTCCTCGTGAAAGCCTTGAAATTGCAATTTCAAGATTGAAGGAGCAAGAAAATAGATCGCGCAAGCCCTCTCAAAGTCTGAAGAACCTGGCAAAAGATGAGTACGAGAGCAACTTCATTTCTGCTGTAGTACCTTCTTGTGAAATTGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGAAGGCACTAAATGAACTTGTCATTCTTCCAATGAGAAGGCCGGAGCTATTCTCTCGTGGAAATTTGTTGCGGCCTTGTAAAGGAATATTACTTTTTGGCCCTCCTGGAACTGGGAAAACCCTTCTGGCTAAGGCACTTGCTACAGAAGCTGGCACAAATTTTCTCAGCATAACTGGATCAATTCTTACTTCGAAGTGGTTTGGAGATGCTGAAAAACTTACCAAGGCCCTTTTCTCGTTTGCCAGCAAGCTTGCTCCTGTCATTATATTTGTTGACGAAATTGACAGTTTGCTCGGTGCTCGAGGTGGCTCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAGTCAAAGAATCCTCATTCTTGGTGCAACAAATCGGCCATTTGATCTGGATGATGCTGTTATCCGTCGCTTGCCAAGACGGATATATGTGGATTTACCAGATGCTGTAAACCGAATGAAGATTCTGAGAATATTTCTAGCACAAGAAAATCTAGATTCCAACTTCGAATATGACAAACTTGCTAACTTAACTGAGGGATATTCTGGCAGTGATTTGAAGAACCTCTGTATTGCTTCGGCATATAGACCTGTTCAAGAGCTCTTAGAGGAAGAAAACAAGAGAGGCAATAGCAGTCCATCTCCAGCATTAAGGCCACTTAATCTGGATGACTTTGTTCAGGCAAAATCAAAGGTTGGTCCATCAGTTGCATATGACGCAGCAAGCATGAACGAGTTGAGGAAGTGGAATGAAATGTATGGAGAAGGTGGAAGCAGGAGAAAATCACCATTTGGATTTGGGAGCTA 3053 0.398 MYFRRIQCRDRRWGLVFQPSKYFIRPRCNNHACSQSLCHEMTVEEHSSHDGVIRRNLLGLFSSRGLSSNSYTVLQGPPALCLKSTQFRVYSSESDGRNASEDKHVHINDGANLDKGKDRQEKFGKDVNNCNGHARLGEQDQEEWLKNEKLAVEFKKNQSPFLTRREKFKNEFLRRVVPWEKINISLDTFPYYIHEPTKTLLVECAASHLRHKDLALSYGARLASSSARILLQGIPGTELYRERLIRALARDLQVPLLVLDSSVLAPYGVDDDLSTDSESDDENAESGEEDSLESEDEHNDASNEEEWTSSTEAKSDASDNEDLDTLASTEAALKKVKEAVQKLVPYATIADFEKVASVESESSESHRSQNVKDSEKSGCQLKKGDRVRYIGPSVQAEDRNRALSKGQRGEVYEVNGDQVAVLLDVSEDHANEAGVQEINEKETELPICWIHAKNIEQDPDAQVQDCYIAIEALCEVLRSKQPLIVYFPDSSRWLHRLVPKSNRSEFVQKVEEMFDKLSDPVVFICGQNKVQSESKESGKFTMILPSFGRVAKLPLSLKRLTEGLKATKRSDDTEIYKLFTNVLCLYPPKEEDLLTTFNKQLEEDRRIIISRSNLNELHKVLQEHGLSCLNLLHVNTDGVILTKQKVEKVVGWAKNHYLSSCSRPLVKGEQLYLPRESLEIAISRLKEQENRSRKPSQSLKNLAKDEYESNFISAVVPSCEIGVKFDDIGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGTNFLSITGSILTSKWFGDAEKLTKALFSFASKLAPVIIFVDEIDSLLGARGGSFEHEATRRMRNEFMAAWDGLRSKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAVNRMKILRIFLAQENLDSNFEYDKLANLTEGYSGSDLKNLCIASAYRPVQELLEEENKRGNSSPSPALRPLNLDDFVQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRRKSPFGFGS 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00928 1017 MobiDBLite consensus disorder prediction 357 378 - -
Bva01g00928 1017 Gene3D - 723 999 IPR027417 -
Bva01g00928 1017 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 399 1015 - -
Bva01g00928 1017 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 396 - -
Bva01g00928 1017 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 399 1015 - -
Bva01g00928 1017 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 396 - -
Bva01g00928 1017 Gene3D - 896 981 - -
Bva01g00928 1017 Pfam ATPase family associated with various cellular activities (AAA) 764 894 IPR003959 GO:0005524|GO:0016887
Bva01g00928 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 722 944 IPR027417 -
Bva01g00928 1017 CDD AAA 762 895 - -
Bva01g00928 1017 ProSitePatterns AAA-protein family signature. 867 886 IPR003960 GO:0005524|GO:0016887
Bva01g00928 1017 MobiDBLite consensus disorder prediction 269 323 - -
Bva01g00928 1017 SMART AAA_5 760 897 IPR003593 -
Bva01g00928 1017 MobiDBLite consensus disorder prediction 303 321 - -
Bva01g00928 1017 MobiDBLite consensus disorder prediction 273 302 - -
Bva01g00928 1017 Pfam AAA+ lid domain 918 953 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00928 Bva-Chr1 7047313 7073641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00928 758 959 Calmodulin-binding Proteins AT3G56690 35.266 3.74e-32 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00928 01 7047313 7073641 Bva01g00928 01 7047313 7073641 ECH