Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00903 ATGAAGAATTCTCTTAGCTTGCTTCTATTAGTACTGCTAGCTGCAGTAATGGTGCAGTTTGGGGAAACTGCACCCTCAGGTTTTGAATATGGCGACGCCCTTGACAAAAGCTTGATGTTTTTCGAGGCGCAAAGGTCTGGTAAATTATCATTGGATCAACGAGTCAAGTGGCGTGGCGATTCGGGTCTAAAGGATGGATTGGAACAAGGAGTGAACTTGATAGGAGGGTACTATGATGCAGGTGATCATGTGAAATTTGGGCTGCCAATGGCATTTAGTGTGACAATgctggcatgggcagccatTGATTTCAGGAAGGAAATCACAGATTTGAACCAAATGGGTCACACTTTGTGGGCCATTAGGTGGGGTACTGACTACTTCATGAAAGCACATCCTCATCCTAATGTTCTTTGGGGACAGgtGGGTGATGGAACTTCTGATCACTACTGCTGGGAGCGTGCTGAAGACATGACAACTTCAAGGACTGCctataaaattgatgaacaGCACCCTGGATCGGATCTAGCTGGTGAAACCGCAGCTGCATTGGCTGCAGCAGCCTTAGCTTTCAAGCCTTACAATTCTTCATACTCTGATCTCCTTCTGGTTCATGCTAAACAGCTCTTCACATTTGCAGATAGATATAGAGGTTTATATGATGACTCAATCTCATGTGCTCAGCAATTCTACACTTCTTCTGGTTATTCAGATGAATTGTTATGGGCTGCTGCCTGGCTACATCGCGCAACCGGCGAGGAATACTACCTCAAGTATGTAGTGGACAATGCTGTGTACATGGGTGGAACTGGATGGTCTGTGAAGGAGTTCTCTTGGGACAACAAATATGCTGGTGTTCTTCTAGAAGGACATGCAGGTTCTTATGACTCTACATTAAAGCAATATCAGGCCAAGGCCAATTATTTTGCCTGTGCTTGCTTGCAAAAGAATGATGGTTACAATGTCAAGACAACTCCAGGTGGATTACTATATGTGCGCGAGTGGAACAACTTGCAGTATGTTTCCTCTGCTGCATTTTTGTTAGCAGTATACTCTAGTTATCTATCAGCAGCAAAAGCTCAACTCAGCTGTCCAGAAGGCCAGATTCAGCCTCCAGAGCTCCTCAATTTTGCCAAGTCACAGGCTGACTATATTCTTGGCAAAAACCCAAAGGACATAAGCTACTTAGTTGGATATGGACCAAAATATCCCATTCATGTACACCATAGGGGTGCTTCCATTGCCTCTGTCTTTGTTCTTCATTCAGAGATTGGCTGTGTGCAAGGTTTCGAAACGTGGTATCACCGCCCCGAAGTAAACCCTAATATCCTCTACGGTGGCCTTGTGGGAGGTCCTGACCAAAACGATGACTTCACCGATGACAGATCGAATTATGAACAAACTGAGCCAACACTTTCAGGCTCTGCTCCTCTTATTGGGCTCTTTGCTAAGCTGCAGACTGTTTATGGTTCTTACCATAAAGAATCACCAAAGCCCAACCCAAAATCACCAAGTACcaacacacaaaaagaatCAGCACCAAAACCATCAGGAGGCGTGCCTGTTGAATTCGTTCACTCAATTACTGGATCATGGACTGCTGGAGAAACGAACTATTACCGTCACAGAGTGGTAATCAAGAATACCTCAGAGAAGCCAATTTCAGATCTTAAGTTGGTGATAGAAAATCTCACAGGTCCTCTCTGGGGTCTCTCTCCAGTAACTCAAGAGAAGAATACCTATGAACTCCCAGAATGGCTTAGGGTCTTGAATCCTGGATCTGAGTGCATGTTTGTCTATGTTCAAGGTGGGCCCCAGGCAAAGATCTCTGTCTCAAGCTACCACTG 1847 0.438 MKNSLSLLLLVLLAAVMVQFGETAPSGFEYGDALDKSLMFFEAQRSGKLSLDQRVKWRGDSGLKDGLEQGVNLIGGYYDAGDHVKFGLPMAFSVTMLAWAAIDFRKEITDLNQMGHTLWAIRWGTDYFMKAHPHPNVLWGQVGDGTSDHYCWERAEDMTTSRTAYKIDEQHPGSDLAGETAAALAAAALAFKPYNSSYSDLLLVHAKQLFTFADRYRGLYDDSISCAQQFYTSSGYSDELLWAAAWLHRATGEEYYLKYVVDNAVYMGGTGWSVKEFSWDNKYAGVLLEGHAGSYDSTLKQYQAKANYFACACLQKNDGYNVKTTPGGLLYVREWNNLQYVSSAAFLLAVYSSYLSAAKAQLSCPEGQIQPPELLNFAKSQADYILGKNPKDISYLVGYGPKYPIHVHHRGASIASVFVLHSEIGCVQGFETWYHRPEVNPNILYGGLVGGPDQNDDFTDDRSNYEQTEPTLSGSAPLIGLFAKLQTVYGSYHKESPKPNPKSPSTNTQKESAPKPSGGVPVEFVHSITGSWTAGETNYYRHRVVIKNTSEKPISDLKLVIENLTGPLWGLSPVTQEKNTYELPEWLRVLNPGSECMFVYVQGGPQAKISVSSYH 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00903 615 SUPERFAMILY Six-hairpin glycosidases 28 491 IPR008928 GO:0005975
Bva01g00903 615 MobiDBLite consensus disorder prediction 492 520 - -
Bva01g00903 615 Gene3D - 26 499 IPR012341 GO:0005975
Bva01g00903 615 Pfam Carbohydrate binding domain CBM49 523 602 IPR019028 GO:0030246
Bva01g00903 615 MobiDBLite consensus disorder prediction 450 472 - -
Bva01g00903 615 MobiDBLite consensus disorder prediction 498 514 - -
Bva01g00903 615 SMART CBM49_2 522 603 IPR019028 GO:0030246
Bva01g00903 615 PANTHER ENDOGLUCANASE 5 8 572 - -
Bva01g00903 615 Pfam Glycosyl hydrolase family 9 30 481 IPR001701 GO:0004553|GO:0005975
Bva01g00903 615 PANTHER ENDO-1,4-BETA-GLUCANASE 8 572 - -
Bva01g00903 615 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 384 410 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00903 Bva-Chr1 6602346 6606952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00903 28 615 Glycoside Hydrolase AT1G48930 68.977 0.0 822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00903 01 6602346 6606952 Bva01g00903 01 6602346 6606952 ECH