Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00879 ATGGCGACACTGCAATTCACTGACTGCTCGAAGCCAGTGATTTTGTTGAGGCCTTCCCTGAGCTCTCTCTTCTCCACCACACATCGCCATTGTCGAACTTCTCAAGCCCGACCTCGCTTCATTCCTAGAGCTTCTTCTGTACCTCAATGTTCACTCACTCGGAGACGCTTCATAGCTGATACTACAGCAATTTCCTTGTCTCTCCCTCCCTTGCTTGGTTTCGAACAAGTAGCCAGGTCCGAAGATGCCCTTTCGGAGTGGGAAAGAGTTTATCTTCCAATTGACCCCGGTGTGGTGCTTCTCGACATAGCTTTTGTTCCTGATGACCCCAATCACGGTTTTCTTCTCGGGACCAGGCAAACCATTTTGGAGACAAAAGATGGTGGAAACACTTGGGCACCTCGTTCGATATCCTCAGctgaagatgaagattttAACTATAGATTTAATTCTATCAGCTTCAAAGGGAAGGAAGGATGGATAGTTGGAAAACCTGCTATCCTATTGTACACTTCTGATTCTGGAGAAAGCTGGGAAAGGATACCTCTTAGTGCTGAACTTCCAGGGGATATGGTATACATAAAGGCAACTGGTGAAAAGAGTGCAGAGATGGTGACTGACGAAGGAGCAATATATGTTACATCAAACAGAGGGTACAACTGGAAGGCTGCAGTTCAGGAAACTGTGTCAGCTACTCTTAATAGAACAGTTTCTAGTGGTATTAGTGGTGCAAGCTATTACACAGGAACTTTCAATACTGTGAATCGCTCTCCAGATGGAAGATATGTTGCAGTCTCAAGCCGTGGCAACTTCTACTTAACCTGGGAACCTGGACAGGCATTCTGGCAGCCACATAACAGAGCAGTTGCCAGAAGAATTCAGAACATGGGATGGAGAGCTGATGGGGGTCTTTGGCTTCTTGTTCGTGGAGGTGGTCTTTATCTTAGCAAGGGCACAGGGATAACTGAAGATTTTGAGGAAGTTCCAGTTCAAAGCCGGGGATTTGGCATTCTAGACGTGGGATATCGCTCATCGGAAGAGGCTTGGGCAGCAGGAGGAAGTGGTATTCTGTTGAGAACTACTAATGGTGGCAAGACATGGATCCGTGATAAGGCGGCAGACAATATTGCTGCAAATTTGTACTCAGTGAAGTTCATTGATGACAAAAAGGGGTTTGTGTTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATA 1217 0.4593 MATLQFTDCSKPVILLRPSLSSLFSTTHRHCRTSQARPRFIPRASSVPQCSLTRRRFIADTTAISLSLPPLLGFEQVARSEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWAPRSISSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDSGESWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEDFEEVPVQSRGFGILDVGYRSSEEAWAAGGSGILLRTTNGGKTWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00879 405 Pfam Photosynthesis system II assembly factor YCF48 83 403 IPR028203 -
Bva01g00879 405 PIRSF Photosystem_II_Ycf48-like 52 405 IPR016705 -
Bva01g00879 405 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 50 405 - -
Bva01g00879 405 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 86 404 - -
Bva01g00879 405 Gene3D - 145 374 IPR015943 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00879 01 6284099 6290712 Bva01g00879 01 6284099 6290712 ECH