Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00878 ATGAATGATGTGGTGACCCAAtacaagaaaggaaaggataGCCTTGCTGCTCAAGGAAAGCGTCGTTACGACCGGAAACAGTCTGGTTATGGTGGCCAGACAAAACCAGTGTTCCACAAAAAGGCTAAGACTACCAAGAAGATTGTTCTGAGGCTGCAATGCCAGGGATGCAAACATGTGTCCCAACATGCTATCAAGCGATGCAAGCACTTTGAGATTGGTGGGGATAAGAAAGGGAAGGGAACTTCTCTTTTCTA 257 0.4358 MNDVVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00878 85 ProSitePatterns Ribosomal protein L44e signature. 43 54 IPR000552 GO:0003735|GO:0005840|GO:0006412
Bva01g00878 85 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 5 85 - -
Bva01g00878 85 MobiDBLite consensus disorder prediction 1 36 - -
Bva01g00878 85 Pfam Ribosomal protein L44 5 74 IPR000552 GO:0003735|GO:0005840|GO:0006412
Bva01g00878 85 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 5 85 IPR000552 GO:0003735|GO:0005840|GO:0006412
Bva01g00878 85 SUPERFAMILY Zn-binding ribosomal proteins 5 74 IPR011332 GO:0006412
Bva01g00878 85 MobiDBLite consensus disorder prediction 14 28 - -
Bva01g00878 85 Gene3D - 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00878 Bva-Chr1 6279638 6280204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00878 5 85 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 95.062 4.99e-51 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00878 01 6279638 6280204 Bva01g00878 01 6279638 6280204 ECH