Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1738 ATGTCTAAAGGGAGAGATCCTGCTATAAAGCTATTTGGAAGAGATATTCCAGTAGAATCAACACACAACATCGATTCACAATCTCAAGCCATGAACAGGTATGATAAATTAACAACAGCTGAAGTAGACATTCATTCTGGATCTAGCAAGCAGAATGATCCTTCAGAAGAAGCAAAGGGTATTGGAAACATTTATAGAGGTCCTTCTGTGGAAGTGGAGGCTAAAGTAGTTCATAGAACTAAGGACCACAAGGCTGCGAGTAGAGATATAGATCATCAAGACAAAGCTTTCAAGAAGCCAGACAAGCTTCTGCCATGTCCTCGCTGCAACAGCTTGGAGACAAAGTTTTGCTATTTCAACAACTACAATGTTAACCAACCTAGGCATTTCTGCAAAAATTGCCAGAGATATTGGACAGCTGGGGGGACAATTAGAAATGTTCCTGTGGGGGCTGGAAAGCGCAAAAATAAGCACTTGGCTCCCGGTGTAGTATCTATCACCCACACAGACTCCAAATCTCTTCCTACAGCTTCAAGACCTATTGGAGGAATGGGGAATATCCCTAGTTTCGGGGAGGAAGCTCCTCTTTGTGAATCCCTGGAAATTGTGTTAAATCTGAAAGGCCAGAAAAGAACTGAAGTGAACTCTTCCTCTGGTGGAGATGATAGTGGGGAGCCTTCCAGAGCTGCTGAATCCAGAGGGGAGAAGGAATGCCCAGAAAATAGAATAGAGCAGGTAGGTTTGCCACAACATTGTAATGGTCTTAATCCTCTGCATCCACTTCATTATTATCCTGTTCCTCCGTGGGCTTACCAATGGAACCCATGTTGGAATTCAATGGTATTTAGACCCAGTCCTGCTTATATGGGTTCTGCAACCATGATGGCAGTTCCAGGTTTCACTGCACCAACTGTAGAATTAACAGCAGCACCTTTATATTGGGGTAGCTTACCAAGCTGGACTGGCCAGAAGGAAGAGTCTCCATTAGTTGGATGTACATTTAGTGGCATCCCATCACCTTCATCTTCCACTAGCAACAGTGTTTGTTCTAGTACTAAGTCTCCAACCTTAGGAAAACATTCTAGAGATGTAAGTACTCAGGCAGGTGATGCAGTGAAACAGAATCTTTGGGTGCCTAAGACTTTGAGAATTAATGATCCTGAAGAAGCTGCAAAGAGTTCTATATGGTCTACTTTTGGTACAAAGCCTGAACAGAACAAACCCATTATGAAAGGCAGTGTTTTTAAATCTTTTGAACCTAAGTCAGATGCCAGTTCTCATATTTCAAACACTGATCAAATTCTGAGTGCAAACCCTGCTGCTTTGTCTCGCTCTGAAACATTTCAGGAAAGAATGTAA 1359 0.426 MSKGRDPAIKLFGRDIPVESTHNIDSQSQAMNRYDKLTTAEVDIHSGSSKQNDPSEEAKGIGNIYRGPSVEVEAKVVHRTKDHKAASRDIDHQDKAFKKPDKLLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNVPVGAGKRKNKHLAPGVVSITHTDSKSLPTASRPIGGMGNIPSFGEEAPLCESLEIVLNLKGQKRTEVNSSSGGDDSGEPSRAAESRGEKECPENRIEQVGLPQHCNGLNPLHPLHYYPVPPWAYQWNPCWNSMVFRPSPAYMGSATMMAVPGFTAPTVELTAAPLYWGSLPSWTGQKEESPLVGCTFSGIPSPSSSTSNSVCSSTKSPTLGKHSRDVSTQAGDAVKQNLWVPKTLRINDPEEAAKSSIWSTFGTKPEQNKPIMKGSVFKSFEPKSDASSHISNTDQILSANPAALSRSETFQERM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1738 452 ProSiteProfiles Zinc finger Dof-type profile. 104 158 IPR003851 GO:0003677|GO:0006355
Bisa12g1738 452 PANTHER CYCLIC DOF FACTOR 2 1 451 IPR045174 GO:0003700|GO:0006355
Bisa12g1738 452 MobiDBLite consensus disorder prediction 211 240 - -
Bisa12g1738 452 MobiDBLite consensus disorder prediction 338 366 - -
Bisa12g1738 452 MobiDBLite consensus disorder prediction 43 62 - -
Bisa12g1738 452 MobiDBLite consensus disorder prediction 226 240 - -
Bisa12g1738 452 Pfam Dof domain, zinc finger 102 158 IPR003851 GO:0003677|GO:0006355
Bisa12g1738 452 ProSitePatterns Zinc finger Dof-type signature. 106 142 IPR003851 GO:0003677|GO:0006355
Bisa12g1738 452 MobiDBLite consensus disorder prediction 420 452 - -
Bisa12g1738 452 MobiDBLite consensus disorder prediction 420 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1738 Bisa-ChrBisa12 34201699 34204164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1738 6 450 C2C2-Dof Transcription Factor Family AT5G39660 34.646 6.81e-68 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa12g1738 zf-Dof 3.2e-32 No_clan