Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2161 ATGATGTCAGCTCCAGCGCCGATGAAGGACGAGACCCAGGGCTCCGGCGGCCGGAAAAATCCCTCGACTGCGAGGCAGGCAGAGCAAGGGTTGAGGTGCCCAAGATGTGACTCACCCAACACCAAGTTCTGCTACTACAACAATTACAGCCTGAGTCAGCCAAGGCATTTCTGCAAGACCTGCCGTAGATACTGGACAAAAGGTGGAGCCTTGCGTAACGTCCCCATCGGAGGTGGCTGCCGGAAGAACAAGAAGCTTAAATCATCATCAAGACTCCCATCAACCGACGGTGGCTTTTCCCTTTCTTCTCTGGATTTTCACTCTGCAGCTTCTGGCTTACCCTTCCCTAGGCTCAACCCTCACCCTCCACCTTTCAACCTTGAAGGTACCTCTGCTTCCTTGATGAATCTCGGCCTTAATTACCCATTTAATGGCGGCATGAGCTCTATGAACGTTCATAGTAGCCTGGCTTCTTCAATTGAGTCACTTAGTTGTATAAACCAAGACTTGCACTGCAAGTTGCAGCAACAGAGACTGGCCACGTTGTTTGGAGAGGATAGTAATAGTACTAGTCTAAAAGATAACGCCACCGTTTCAGGGGTTCATGTAGTTGAAAGCCAGAGTCAGAGCCAGAGATTACCACAGCCTTTTCTGTTTCAGGACCTTGAGATTTCAAAGCCTGAGGAGATCTGCCCCGTTGGTGGTGTTAATCTGACAAGAGACATGTCCACTGAGTGGTTCTTTGGGACTTCTTATGCTTCAGTGACTCCTACACCAACTACTAGTGGTTGTGGGAATGGGAATGATAATGATAATGGAAGCAATTGGAGTGGAGTTCGTGGTTGGGGTGATCTGCAGCAGCAATACAGTGCTTTGCCCTAG 882 0.4932 MMSAPAPMKDETQGSGGRKNPSTARQAEQGLRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKLKSSSRLPSTDGGFSLSSLDFHSAASGLPFPRLNPHPPPFNLEGTSASLMNLGLNYPFNGGMSSMNVHSSLASSIESLSCINQDLHCKLQQQRLATLFGEDSNSTSLKDNATVSGVHVVESQSQSQRLPQPFLFQDLEISKPEEICPVGGVNLTRDMSTEWFFGTSYASVTPTPTTSGCGNGNDNDNGSNWSGVRGWGDLQQQYSALP 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2161 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 182 IPR045174 GO:0003700|GO:0006355
Bisa11g2161 293 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Bisa11g2161 293 Pfam Dof domain, zinc finger 30 85 IPR003851 GO:0003677|GO:0006355
Bisa11g2161 293 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Bisa11g2161 293 MobiDBLite consensus disorder prediction 258 281 - -
Bisa11g2161 293 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2161 Bisa-ChrBisa11 45225078 45225959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2161 5 293 C2C2-Dof Transcription Factor Family AT5G65590 38.507 1.09e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa11g2161 zf-Dof 8.2e-33 No_clan