Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1677 ATGCAGGACCCAACCGCATTCCAACCCATGAAAAGCCATGGCTTTCCCGAACAAGAACAGCTCAAATGCCCGCGTTGTGATTCCACAAACACAAAATTCTGCTACTACAACAACTACAACCTCTCGCAGCCGCGCCATTTCTGCAAGAATTGCAGAAGGTATTGGACCAAAGGAGGCACTCTCCGCAACATCCCCGTCGGAGGCGGAACCCGGAAGAACACAAAACGATCGTCCACTACCACCAAACGCTCTTCTGCATCACCATCATCGTCTTCTCCGTTGGTTCCGTCATCCATCGCAGATCCCGACCCGACCCGATTTTACGCCACCCCGAGTAGCGGGAGCTTCAGTTCGCTTCTGGCATCGTCTGGGCACATGGGGAGTCTATTCGAGGGTCTGAATTCAAATGGGTCTGCTTTGAAAATGGCGGACTTGGGTGAATCTACGGAGAATTTTGCGAGGTCTGTTCAACGGGTTGCGAATTCGGGCTCGGAGATGCAGAGTAATAATGGCGATTCGGAGAGGTTTCTGGGTTTGCAAAATGGTGGAAATGGATGGTCTAACCTCGCAATGTATACACCAGGCTCCAGCTTTCATTAG 600 0.515 MQDPTAFQPMKSHGFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGTLRNIPVGGGTRKNTKRSSTTTKRSSASPSSSSPLVPSSIADPDPTRFYATPSSGSFSSLLASSGHMGSLFEGLNSNGSALKMADLGESTENFARSVQRVANSGSEMQSNNGDSERFLGLQNGGNGWSNLAMYTPGSSFH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1677 199 MobiDBLite consensus disorder prediction 1 21 - -
Bisa10g1677 199 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
Bisa10g1677 199 ProSitePatterns Zinc finger Dof-type signature. 23 59 IPR003851 GO:0003677|GO:0006355
Bisa10g1677 199 MobiDBLite consensus disorder prediction 70 98 - -
Bisa10g1677 199 MobiDBLite consensus disorder prediction 62 106 - -
Bisa10g1677 199 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 152 IPR045174 GO:0003700|GO:0006355
Bisa10g1677 199 Pfam Dof domain, zinc finger 19 75 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1677 Bisa-ChrBisa10 45779562 45780161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1677 15 130 C2C2-Dof Transcription Factor Family AT1G51700 57.447 1.91e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa10g1677 zf-Dof 2.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1677 10 45779562 45780161 Bisa10g1677 10 45779562 45780161 ECH
Bisa10g1677 10 45779562 45780161 Bisa06g1765 06 59179245 59179925 PCT