Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0971 ATGGAGTCCTCGAGGTGGAGACCCAGCATTGAGGAAGCTCCCAATTGCCCCCGATGTGCCTCCTCCAACACTAAATTCTGCTACTTCAACAACTACAGCTTGTCCCAACCCAGATACTTCTGCAAATCATGTCGCCGCTACTGGACCAAAGGCGGCTCCCTGCGTAACGTCCCAGTAGGCGGCGGTTGCCGGAAAGTCCGCCGTGCAAGAGCCTCCTCTAGGCCCACCCCACCCCAACAGAGTACTGCCCCTGTTCCTGAGGACAGAGATGATGATCCCCATAACCACGAAACCCATGGGTGTGACATTGACATGGCCCTTGTGTTTGCCAATTTCTTGAACCAAAACGCCACCACGGCCTCCCATCAACACTTGGACGACGAAGCCAATTCTATGACATCAAATGCAACCACACACTCTGATCCCCATGTCGTGGTAGGGGGGAGAATTACTGAAGAAGAACTGAGTGGAACTGATCAGGCGGAGGGGTTGCTGGGTGGGGATGAATTAGCGGCCCAGGATGTTTTCTGGTCTGATGTTACGACGTCGTCTTCATTCCCCTGGCAACTGCCTCTCATGCCGTCGCGGCAGGAGTTGGAGTTGGAGTACTCCATGGCCCTGGGCTTGCCTTTCCATGAGGATGCTCAATTCCCAATTACTTCTTCCATGAATTCAACAAGCGATGATTGGAGTTGGAGTTCCTTAATTTGA 711 0.5316 MESSRWRPSIEEAPNCPRCASSNTKFCYFNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKVRRARASSRPTPPQQSTAPVPEDRDDDPHNHETHGCDIDMALVFANFLNQNATTASHQHLDDEANSMTSNATTHSDPHVVVGGRITEEELSGTDQAEGLLGGDELAAQDVFWSDVTTSSSFPWQLPLMPSRQELELEYSMALGLPFHEDAQFPITSSMNSTSDDWSWSSLI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0971 236 MobiDBLite consensus disorder prediction 122 141 - -
Bisa09g0971 236 MobiDBLite consensus disorder prediction 122 142 - -
Bisa09g0971 236 Pfam Dof domain, zinc finger 13 68 IPR003851 GO:0003677|GO:0006355
Bisa09g0971 236 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 137 IPR045174 GO:0003700|GO:0006355
Bisa09g0971 236 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Bisa09g0971 236 MobiDBLite consensus disorder prediction 59 98 - -
Bisa09g0971 236 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0971 Bisa-ChrBisa09 14199346 14200056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0971 5 140 C2C2-Dof Transcription Factor Family AT1G21340 50.000 4.59e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa09g0971 zf-Dof 7.3e-32 No_clan