Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2479 ATGTCGGAAGCAAAAGACCCGGCGATCAAGCTCTTTGGGAAGACGATCCCGCTGCCGGATATCCCGGTCGGATCCGGAGGCGCTGTCGGAGCTCCAGCTTCGCGTTCTGGGGATATTGTTGATGATAGTATTGATCAGGACCATGCTTCTCCCGCCAACTCATCGCTAGACTCCCATACCAACGGGGATAGAGGAGAGCAACAGACTGGGAAGGACACTTTGGAAGAAAAACCAATTGAGAATAAGGAAGATGGAGCCCCCACTCAATCCGCTGAAGAGTTCACCAATCCAGATGTAGCCTCAAGAACAGGTGAAGAATCTAATGCAGCCTCCATTGAGAAGGAGGCTACTGCATTGAAGGCTTCAAAACCTGAAGAAGAACAGAGTGAGACAAGTAATCTCCAAGAGAAAACCACCCTGAAGAAGCCAGACAAAATACTGCCTTGTCCCCGCTGTAATAGCATGGACACCAAATTCTGCTACTACAATAATTACAATGTCAACCAACCCCGTCACTTCTGCAAGAACTGCCAGAGATACTGGACTGCTGGTGGAACAATGAGGAATGTGCCTGTTGGTGCCGGTCGTCGGAAGAACAAGAACTCTACTTCTCACTATCGTCAGATAACTGTCCCTGAAGCACTCCAGAATGTTCGAACAGACTTGCCAAATGGAGTTCATCATCCTTCGTTGAAGCCTAATGGCACAGTCCTTACATTTGGATCTGACACACCATTGTGTGAATCAATGGCATCTGTTTTGAACCTTGCTGATAAAACAATGCATAACTGCCCAAGAAATGGATTTCATAGACCTGAAGAACTAAGAATTCCTGTTCCCTATGCTAGTGGAGAGAAAGGGGATGATCATTCTAGTAAGTCTTGTGTAATGTCAACAAAGCCAATGGAAGATAAAAGCGTCAACCGGCCCCAAGAACAAGTTATGCAGAATTGTCAGAGCTTCCCACCTCAAGTTCCCTACTATCCGGGGGCCCCTTGGCCTTTTCCATGGAGTCCAGCACAGTGGGGCTCTCCAGTACCACCACCTGCATTTTGCCCTCCAGGATTTACCATGCCATTCTATCCTGCAGCAGCAGCAGCATATTGGGGTTGTACCGTGTCAGGTGCTTGGAACATCCCATGGATCGCACAACCATCATCACCAACCAGCGCAAGCCCTAATTCTGGCCCTAACTCCCCAACCTTGGGTAAACATTCAAGGGAAGAAAACATGCTCAAGATAAATGACTCGGGGGGAGAGGATGAGCAAAGAAAAGAAAATAATAAAGAAAAGTGCCTTTGGGTTCCAAAAACGTTGAGGATTGATGACCCAGGAGAAGCAGCTATAAGCTCAATATGGACAACGCTGGGGATTAAGAGTGATAAGGCTGACTCAGGTCAAGGGGGAGGGCTCTTTAAAGCATTCCCATCAAAGGGTGATGAAAAAGATCATTCAGTGCAAACCTCAACTGTCTTGCAGGCCAATCCAGCTGCTTTGTCTAGGTCTCTCAACTTCCATGAGACCTCGTAA 1530 0.4758 MSEAKDPAIKLFGKTIPLPDIPVGSGGAVGAPASRSGDIVDDSIDQDHASPANSSLDSHTNGDRGEQQTGKDTLEEKPIENKEDGAPTQSAEEFTNPDVASRTGEESNAASIEKEATALKASKPEEEQSETSNLQEKTTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSTSHYRQITVPEALQNVRTDLPNGVHHPSLKPNGTVLTFGSDTPLCESMASVLNLADKTMHNCPRNGFHRPEELRIPVPYASGEKGDDHSSKSCVMSTKPMEDKSVNRPQEQVMQNCQSFPPQVPYYPGAPWPFPWSPAQWGSPVPPPAFCPPGFTMPFYPAAAAAYWGCTVSGAWNIPWIAQPSSPTSASPNSGPNSPTLGKHSREENMLKINDSGGEDEQRKENNKEKCLWVPKTLRIDDPGEAAISSIWTTLGIKSDKADSGQGGGLFKAFPSKGDEKDHSVQTSTVLQANPAALSRSLNFHETS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2479 509 ProSiteProfiles Zinc finger Dof-type profile. 147 201 IPR003851 GO:0003677|GO:0006355
Bisa07g2479 509 MobiDBLite consensus disorder prediction 64 87 - -
Bisa07g2479 509 MobiDBLite consensus disorder prediction 386 408 - -
Bisa07g2479 509 MobiDBLite consensus disorder prediction 47 63 - -
Bisa07g2479 509 PANTHER CYCLIC DOF FACTOR 2 1 509 IPR045174 GO:0003700|GO:0006355
Bisa07g2479 509 Pfam Dof domain, zinc finger 144 201 IPR003851 GO:0003677|GO:0006355
Bisa07g2479 509 MobiDBLite consensus disorder prediction 1 139 - -
Bisa07g2479 509 MobiDBLite consensus disorder prediction 118 139 - -
Bisa07g2479 509 MobiDBLite consensus disorder prediction 464 490 - -
Bisa07g2479 509 MobiDBLite consensus disorder prediction 386 405 - -
Bisa07g2479 509 ProSitePatterns Zinc finger Dof-type signature. 149 185 IPR003851 GO:0003677|GO:0006355
Bisa07g2479 509 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2479 Bisa-ChrBisa07 55478686 55481683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2479 6 509 C2C2-Dof Transcription Factor Family AT5G39660 44.112 1.17e-110 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa07g2479 zf-Dof 3.2e-32 No_clan