Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2442 ATGGAGAGTAGTGGGTGGAAGCCTAATGTGGAGATATCCCCAAACTGTCCTCGATGTGGGTCATGCAACACCAAGTTCTGCTACTACAATAACTACAGCTTAACCCAACCTCGCTACTTCTGCAGGGGCTGTAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAACGTCCCCGTCGGCGGAGGCTGCCGGAAGAACCGTCGGAGTCATAAGTCCTCCTTCTCATCACACTTCACGCCCACACATGCCCTCCCTAATTCCAGCACTCTACCTAGTAACGGAAATCCATCTTCTTCCTCTTCGTCACTACTACATGCTCCAAATATCGATCTTGCGCTTGTTTATGCAAATTTCCTCAATCCGAAGCAAGAGTCAACTGTGCCAACCACAGAAGTTGGGCCGATCAGTGATGTTAGTACTTTGCCACAATATGATCATGTTCCCCATGAGGAATCCCAGTTGATGAGTGAGGGTGACCAAATGTTTTCGCAGGGGTTCAACTCTCTGGATAGAAATTATCAACAAGATGGAATTGGGCGTTGTAGTAGTAATCATGATATTATGAATTTTGAATTGCCACCATTGCCAGGTGAAGAGGCAGCCTTGCATGATGATATGATGTGGTCCAATTCTGCTCTCCACTCAACACAGTCTCCTCTTTTTGGTGCTGATGATGCTCAAGATGCGGATTTTTTGATGAATAATTGGAGCCACTTCGATTTGCCCAGGCCTTGA 735 0.4721 MESSGWKPNVEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCRGCRRYWTKGGSLRNVPVGGGCRKNRRSHKSSFSSHFTPTHALPNSSTLPSNGNPSSSSSSLLHAPNIDLALVYANFLNPKQESTVPTTEVGPISDVSTLPQYDHVPHEESQLMSEGDQMFSQGFNSLDRNYQQDGIGRCSSNHDIMNFELPPLPGEEAALHDDMMWSNSALHSTQSPLFGADDAQDADFLMNNWSHFDLPRP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2442 244 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 6 37 IPR017896 -
Bisa07g2442 244 MobiDBLite consensus disorder prediction 73 102 - -
Bisa07g2442 244 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Bisa07g2442 244 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Bisa07g2442 244 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
Bisa07g2442 244 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 169 IPR045174 GO:0003700|GO:0006355
Bisa07g2442 244 MobiDBLite consensus disorder prediction 59 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2442 Bisa-ChrBisa07 54774747 54775481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2442 6 241 C2C2-Dof Transcription Factor Family AT3G52440 41.797 1.45e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa07g2442 zf-Dof 2.2e-30 No_clan