Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1039 ATGGCCGAAGTGCAAAACGGCCAAGACAGTCAGGGGATTAAGCTGTTTGGAGCCACCATCACGTTGCACCATGGAAGACAAGTGGTGGTGAAGGACGTTGATCAGAAGGGGAGCGAGGATCGGACGGTGGAGAAGAGGCCAGATAAGATCCTGCCTTGTCCCAGATGTAAGAGCATGGAGACCAAGTTTTGTTACTTCAATAATTACAACGTTAATCAGCCTAGGCATTTCTGTAAGGGCTGTCAGAGGTACTGGACCGCCGGCGGCGCCCTTCGCAATGTGCCCGTCGGTGCCGGCAGGCGTAAGGCCAAGCCGCCGGGCCACGGGGAGGCCGGCTTCCCGGAGGAGTCCGAAACACACCGCCAGTTTGGCGTGGAGCATCAGGGATTGAGTATTGTGGACGAGTGGCATGTTGCCATGGCTCAGAGTGATTTCCGGCAGCTTTTGCCGGCGAAACGTCGGAGGAACACCTCAGGCGGTCAACCTTTCTAA 492 0.565 MAEVQNGQDSQGIKLFGATITLHHGRQVVVKDVDQKGSEDRTVEKRPDKILPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKPPGHGEAGFPEESETHRQFGVEHQGLSIVDEWHVAMAQSDFRQLLPAKRRRNTSGGQPF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1039 163 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Bisa07g1039 163 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Bisa07g1039 163 MobiDBLite consensus disorder prediction 96 116 - -
Bisa07g1039 163 Pfam Dof domain, zinc finger 48 104 IPR003851 GO:0003677|GO:0006355
Bisa07g1039 163 PANTHER CYCLIC DOF FACTOR 2 35 115 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1039 Bisa-ChrBisa07 26036407 26036898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1039 8 161 C2C2-Dof Transcription Factor Family AT2G34140 58.084 4.35e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa07g1039 zf-Dof 2.8e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1039 07 26036407 26036898 Bisa07g1039 07 26036407 26036898 ECH