Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0845 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGGGTTGATTGGAACCAGACGTTACTGCAAGATCAAAACTTGGAGCTTCCGAAGCCTCCATTGATGAGAAAATTACAACAACAACAGCAACAGCAACAACAGTCTCAGCAATCATCATCTTCGGAGCCTTTGAAGTGTCCGAGGTGTGATTCGACGAATACTAAGTTCTGCTACTACAACAATTACAACAAGTCTCAGCCTCGCCATTTCTGTAGAACCTGCAAGAGGCACTGGACTAAAGGTGGCACCTTGCGCAATGTCCCCGTCGGCGGCGGCCGGAAAAACAAACGGGTCAAGAAATCATCCACCCCCACCTCTTCGTCCGCCGCCGCCGCCTCCGCTGCCGCCGTCGGCGGTACCCACTTGAGAGTTCAAACTAATAATCCTCTTCAAAAGCAGAGCCTTCTTCCTCTTCCTCCTTCCTCTGCTTCTCTCTATCAATCTTTGATTCGTCCTCCGATACCACAATCGTTGCTTCCACAGCAGAATCTCATGAACTCACAGAGTAAAGATTTTGGCGATGGCAGCTTCTTGAGTTCGACGACTCTGCCACTTCTTTCTCAAAATCAGAGCTTTCTCTTCCCCTTTGCAAGCTCGAGCTCTTTCGAGACCACCCCATGTTCTGTTTCAATTTCAACCTCTTTGAGATCATCCTCCAACGTTTATAACTACGGGGAAGAGTCAAAGACATTGGAGGAGCCAACACCGACACAGCCATCACAGCCATGGGAGATACCTTCAACGAGCGTAGGCCATATGGAAATGTCAAGCTATTGGAGCTGGGAGGATATCGATTCCTTGGTCTCAACTGATCTCAATGTTCCCTGGGACGATTCTGATTTAAAACCCTGA 885 0.4847 MGLSSKQVSSSGVDWNQTLLQDQNLELPKPPLMRKLQQQQQQQQQSQQSSSSEPLKCPRCDSTNTKFCYYNNYNKSQPRHFCRTCKRHWTKGGTLRNVPVGGGRKNKRVKKSSTPTSSSAAAASAAAVGGTHLRVQTNNPLQKQSLLPLPPSSASLYQSLIRPPIPQSLLPQQNLMNSQSKDFGDGSFLSSTTLPLLSQNQSFLFPFASSSSFETTPCSVSISTSLRSSSNVYNYGEESKTLEEPTPTQPSQPWEIPSTSVGHMEMSSYWSWEDIDSLVSTDLNVPWDDSDLKP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0845 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 214 IPR045174 GO:0003700|GO:0006355
Bisa07g0845 294 MobiDBLite consensus disorder prediction 34 57 - -
Bisa07g0845 294 MobiDBLite consensus disorder prediction 96 120 - -
Bisa07g0845 294 Pfam Dof domain, zinc finger 54 107 IPR003851 GO:0003677|GO:0006355
Bisa07g0845 294 ProSitePatterns Zinc finger Dof-type signature. 57 93 IPR003851 GO:0003677|GO:0006355
Bisa07g0845 294 ProSiteProfiles Zinc finger Dof-type profile. 55 109 IPR003851 GO:0003677|GO:0006355
Bisa07g0845 294 MobiDBLite consensus disorder prediction 21 57 - -
Bisa07g0845 294 MobiDBLite consensus disorder prediction 236 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0845 Bisa-ChrBisa07 21886936 21887820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0845 34 120 C2C2-Dof Transcription Factor Family AT5G60850 62.500 4.77e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa07g0845 zf-Dof 2.2e-31 No_clan