Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1396 ATGTCAATGCGATACATTTTGCACTTCCATATGAATTCTCAAAACAACATATTAAGACAAACAAGGATGGAAGGGACACCTCAAAACTCATTCACAAACCCTAAACCAGTGGTGATGGAGAAGAAGGCAAGGCCACAAGAGCAATTAAACTGTCCAAGGTGCAATTCAACCAACACCAAGTTCTGCTATTACAACAACTACAGCCTCACACAGCCTAGATACTTCTGCAAGACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTAAGAAACATCCCCGTTGGAGGAGGTTCTAGAAAGAACAAGACCAAGGTCACCACCTCCACCTCTTCCTCGACCCCATCACCAAAAATTCTTGACCTAAACCCGCCTTTACAGGGCTTCTCGTCAGTACTGGAATCGTCTCCAGGGCTGAAGGATCCGAGGTTAAACCATAATCGGAGCCAAATTAACCAAAGTTGTACTATTTCTACACATCAAAACCTTGAATTGCAAGGGGGAGGCCAAGATCTCAACCTGGCTTTCCCAACTTCTTCTCTTTCAGCTCCTCCTCATCATGAGCTTCTCAGGACTGGAATAATGGACTCAAGGGGTTTGAATGGTAGTAATGTTCCTTATGTTCCTTCATTGATGATGCCGGGCTCATATGGTAACCTTAATTACCCATCTGGGTTTTCCATGCAAGAGGAAACTAAACCAAGCATGATGGGTTTTTCAGTTGACGGGCTTGGAAATAGATCATATGGAGTTCAAGAGAATGACAACAATGGAGGGAGGCTTCTGCTTCCTTTTGGAGGAGTCAAGCAGATTTCAGGTGGTGCTGAAGTCGATCAAAATAACAAAGAACAAGGGAATTCAACTGGGTTTTGGACTGGAATGATTGGTGAAGGATCGTGGTAA 900 0.4433 MSMRYILHFHMNSQNNILRQTRMEGTPQNSFTNPKPVVMEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKTKVTTSTSSSTPSPKILDLNPPLQGFSSVLESSPGLKDPRLNHNRSQINQSCTISTHQNLELQGGGQDLNLAFPTSSLSAPPHHELLRTGIMDSRGLNGSNVPYVPSLMMPGSYGNLNYPSGFSMQEETKPSMMGFSVDGLGNRSYGVQENDNNGGRLLLPFGGVKQISGGAEVDQNNKEQGNSTGFWTGMIGEGSW 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1396 299 MobiDBLite consensus disorder prediction 278 299 - -
Bisa06g1396 299 MobiDBLite consensus disorder prediction 278 293 - -
Bisa06g1396 299 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Bisa06g1396 299 Pfam Dof domain, zinc finger 47 103 IPR003851 GO:0003677|GO:0006355
Bisa06g1396 299 MobiDBLite consensus disorder prediction 90 121 - -
Bisa06g1396 299 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Bisa06g1396 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 214 IPR045174 GO:0003700|GO:0006355
Bisa06g1396 299 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1396 Bisa-ChrBisa06 49228985 49231765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1396 37 299 C2C2-Dof Transcription Factor Family AT3G61850 41.034 1.89e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa06g1396 zf-Dof 6.3e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1396 06 49228985 49231765 Bisa06g1396 06 49228985 49231765 ECH