Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0957 ATGCCAAATCAGAGCCCCATTGTGCAGAGCGCTTTCCTTTTGTTACTTTTGCAGGTCTTAACCAACAATGTAGCTCCCGTGGGCTGTAAATCCACAATCGAGCCCTGCTCAAACTCCGACTCCTGCAATGCCCTCCTCGGTTACACCCTCTACACTGACCTGAAGGTCTCCGAGGTAGCCTCCCTCTTCCAAATCGACCCCATTGCTCTTCTCACCGCTAATGCCATCGACATGTCATACCCCGACGTAGAGCACCACATTCTCCCCTCCCAACTCTTCCTCAAAATCCCCATCACCTGTTCCTGCGTCGACGGAATTCGCAAATCGGTGTCCACCCACTACAAAACTCGCCCCTCTGACACTCTCGTGTCCATTGCCGATTCAATATATGGTGGTCTGGTGTCTGCCGATCAGCTCAAGGAGGCCAACTCCATAACCGACCCTTCTGTACTGGACGTGGGTCAGAGCCTTGTGGTGCCCCTTCCCTGCACTTGCTTCAATGGGACAGATAACTCGTTGCCTGCGATTTATCTGTCGTATGTGGTGCAGCCGATTGATACTTTGGCTGCAATTGCTGCCAGGTATGCCACCACTCTCACTGATTTGATGGATGTCAATGCCATGGGGAATTCAGCTATCACTGATGGTGATATTCTTGCTGTTCCAATTCCGGCTTGCGCATCAGATTTTCCTAGCTCTGCTGCTGATTATGGTTTGCTTGTCCCTAATGGAAGCTATGCTATTACAGCAAGTCACTGTATGCAGTGTAGCTGTGGACCACGAAATCTAAATTTGTACTGTATGCCTGCTTCTCTGGCTGCTTCTTGTTCTAGCATGCAATGTAAAAACAGCAACCTTATGGTTGGGAATGTTACTGCACAACAGAGTAGTGCTGGCTGCAATGTTACTTCTTGTAGTTATGGTGGTTTTGTTAATGGCACAATAGTAACATCGTTGTCCCCATCTCTTCAGCCTCGATGCCCAGGACCGCAGCAATTTCCCCCACTCTTAGCTCCGCCTACTACTGTTACTAAGATTTCAGAACTTGCACCATCACCATCACCATCACCATCACCTCAGTCAGGCTTAGGCGGTCCAACAAATCCCAAATCTTCAGTGGTGCCTTCAACAGGTTCATTGCCCGGATTTACATCGGCAAATGGCCCCGCAAGTGGGTTGGCTTCTGGTGTGTCTGCTGCTTCCTCCTTGATGAATCAGTTACCCACTTTGACATCTGCACTTGTGTTATTGTCTGTCAATTTGTTGATCTTTGTGGCACCGTGA 1284 0.4922 MPNQSPIVQSAFLLLLLQVLTNNVAPVGCKSTIEPCSNSDSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANAIDMSYPDVEHHILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLVSIADSIYGGLVSADQLKEANSITDPSVLDVGQSLVVPLPCTCFNGTDNSLPAIYLSYVVQPIDTLAAIAARYATTLTDLMDVNAMGNSAITDGDILAVPIPACASDFPSSAADYGLLVPNGSYAITASHCMQCSCGPRNLNLYCMPASLAASCSSMQCKNSNLMVGNVTAQQSSAGCNVTSCSYGGFVNGTIVTSLSPSLQPRCPGPQQFPPLLAPPTTVTKISELAPSPSPSPSPQSGLGGPTNPKSSVVPSTGSLPGFTSANGPASGLASGVSAASSLMNQLPTLTSALVLLSVNLLIFVAP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0957 427 Gene3D LysM domain 106 167 IPR036779 -
Bisa05g0957 427 MobiDBLite consensus disorder prediction 363 382 - -
Bisa05g0957 427 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 11 331 - -
Bisa05g0957 427 ProSiteProfiles LysM domain profile. 112 159 IPR018392 -
Bisa05g0957 427 SUPERFAMILY LysM domain 178 223 IPR036779 -
Bisa05g0957 427 SMART LysM_2 113 160 IPR018392 -
Bisa05g0957 427 SMART LysM_2 179 222 IPR018392 -
Bisa05g0957 427 Pfam LysM domain 114 160 IPR018392 -
Bisa05g0957 427 Pfam LysM domain 180 222 IPR018392 -
Bisa05g0957 427 Gene3D LysM domain 168 230 IPR036779 -
Bisa05g0957 427 CDD LysM 112 159 IPR018392 -
Bisa05g0957 427 SUPERFAMILY LysM domain 112 161 IPR036779 -
Bisa05g0957 427 MobiDBLite consensus disorder prediction 346 382 - -
Bisa05g0957 427 CDD LysM 179 221 IPR018392 -
Bisa05g0957 427 ProSiteProfiles LysM domain profile. 178 221 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0957 Bisa-ChrBisa05 16479170 16482064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0957 12 404 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 66.834 0.0 533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0957 05 16479170 16482064 Bisa05g0957 05 16479170 16482064 ECH