Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0950 ATGGCTTCTCGTAATCACCTTCTTCCTCTAATTCTCTCTCTGCTGGCAACTTTATTCGTAGGAGCTTTAGCCTTTGATGCTTCCATTAATTCACCTTTTTCCCCTCTTAATTGCTCTGAACAAGTCCAAACATGCAATGCCACACTATACCACATAAACCACAATCTCAGCGTAGACCAAATTAAGTCTTATTACTCAGTTGATTCCACCCAAATCAGTCCCATAATTCGTGGGAATAATCAGGACTACCTCATCACAGTACCATGTTCTTGCAAAACCAATCGTGAATTAAGGGGGTATTTCTATGACACCACCTACAAAATGAGGAGAAATGACACTTTCATTGACATTTCAGAGCAGATTTATAGTGGACAAGCGTGGCCTGATCAACATACGTTGCTACCAGACCAGAAATTACGGATACACCTTGTGTGTGGGTGTACAGAGAGCATTTCTGAAATAGTGGTGACTTATACAGTGCAACCAAATGATACTGTATCAGCCATTGCTAATCTGCTGTCTTCTGAACTCAGTGAGATGCAGAGTCTTAATGAAGTACTGCGTCGAACCCCATCTTTTGTGGATGTGGGCTGGGTGCTATTTGTACCTATGCACAAGAATGCAAATCCTTAG 633 0.4171 MASRNHLLPLILSLLATLFVGALAFDASINSPFSPLNCSEQVQTCNATLYHINHNLSVDQIKSYYSVDSTQISPIIRGNNQDYLITVPCSCKTNRELRGYFYDTTYKMRRNDTFIDISEQIYSGQAWPDQHTLLPDQKLRIHLVCGCTESISEIVVTYTVQPNDTVSAIANLLSSELSEMQSLNEVLRRTPSFVDVGWVLFVPMHKNANP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0950 210 Gene3D LysM domain 146 209 IPR036779 -
Bisa05g0950 210 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 35 206 IPR044812 GO:0019199|GO:0045087
Bisa05g0950 210 Pfam LysM domain 158 203 IPR018392 -
Bisa05g0950 210 ProSiteProfiles LysM domain profile. 156 202 IPR018392 -
Bisa05g0950 210 SMART LysM_2 157 203 IPR018392 -
Bisa05g0950 210 SUPERFAMILY LysM domain 156 203 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0950 Bisa-ChrBisa05 16350209 16350841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0950 4 204 LysM Receptor-like Protein (LYPs) Gene Family AT1G77630 26.087 6.64e-10 56.2