Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0788 ATGCAATCCAATCCTAAACAGAGCATGGGGTTCCCCCCACCACAAAGGACTGAACCCCTGCCATGTCCAAGATGCGATTCCACTGCCACCAAGTTCTGTTACTACAACAACTACAACCTTTCTCAGCCACGTTACTTGTGCAAGTCTTGCCGTCGCTACTGGACCCACGGCGGCACCCTCCGCAATGTCCCCGTCGGCGGTGCCACTCGCAAGATTTCTAAGAAGCCACGCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGTCGTCGTCGTCTTGCTCTGTTCCGTCCACCACTGCACGGCCTGCAATGTTGGCACCCACTGATCACCATACCAACACACCTGTGTTGTCGTCTTTGGGATTAACTGAGTTTCCATATATGAGTCTGGACGATGCGCCGAGTGGAGGGGTTGGGGTTTTTGCGGATTTCAGTGGAAGTGGCTCTGCTTTACTGGGTTCTTCCTCAGACTCAGACTATAATAACCCTTGGGACGATGAACTTGCCTGGCCCACTCTCGCCATTTCCACGCCACATCATCCTCCAGAAAACCTCGACTAG 567 0.5238 MQSNPKQSMGFPPPQRTEPLPCPRCDSTATKFCYYNNYNLSQPRYLCKSCRRYWTHGGTLRNVPVGGATRKISKKPRTSSSSSSSSSSSSSSSSCSVPSTTARPAMLAPTDHHTNTPVLSSLGLTEFPYMSLDDAPSGGVGVFADFSGSGSALLGSSSDSDYNNPWDDELAWPTLAISTPHHPPENLD 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0788 188 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 109 IPR045174 GO:0003700|GO:0006355
Bisa05g0788 188 MobiDBLite consensus disorder prediction 1 22 - -
Bisa05g0788 188 MobiDBLite consensus disorder prediction 73 103 - -
Bisa05g0788 188 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Bisa05g0788 188 Pfam Dof domain, zinc finger 19 74 IPR003851 GO:0003677|GO:0006355
Bisa05g0788 188 MobiDBLite consensus disorder prediction 64 115 - -
Bisa05g0788 188 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0788 Bisa-ChrBisa05 13272752 13273318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0788 13 86 C2C2-Dof Transcription Factor Family AT5G66940 68.919 1.11e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa05g0788 zf-Dof 1.5e-32 No_clan