Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0294 ATGTTGCCGTTCCCAGTGCATCCGAAGCCCTTACCCAGGTGGAAACCCAACATTGTTGAACCAGCTCCCAACTGTCCCCGTTGTGCCTCTTCCAACACCAAATTCTGTTACTACAACAACTACAGCTTGTCCCAGCCCAGGTACTTCTGCAAAGCTTGCCGCCGATACTGGACCAAAGGCGGTTTCCTCCGCAACGTCCCCGTCGGCGGCGGCTCCCGCAAATCCCGCCGCTCTAAGACCTCCCGACCTCCCTACAACCTTCATTCTCATGCTAGTTCCTTCTTCAATGGAGATCACTCGGTGGCTGATGATACATCCGACCATTCCAATTCCAACACTGATATCGACATGGCTCTTGTGTTTGCCAAGTTCTTGAGTGGTCAGGATGAGGTCACCAATGCGTCATCCTCATCCCAGTCCCACTGTTTGACACCGGAAAGCCTTGAAGCCGAGAACGACGCGCCTCAGCCGTCCGATCCGGTCGCGGATTCATCGGACGCGTTGATTCCCCGAGATGACCGGTCCAGGTCGACGGTTGAGAGTTTTGGGTTGATGAGTGGGATTGAAGCTGCTGAGTGGGAGAGTTTGTTAGGTGGCGAGCAGGAAGAAGTGGTCCAGGATGTTTTCTGGTCTGATGGTACGACGTCGTCTTCAGTCACGTGGCAAGCACCGCCATTGATGCAACTGCAGGAGGATTTGGAGGATCCGATTCCCTTGAATTACGAGGAGGACGCTCAATTACCTGTCACTGATGCTTGGAGTTGGAATTCCTTTGATTTTTCCAGTTTGCAAGTCTTCTCACAACCGCCTTGA 813 0.5326 MLPFPVHPKPLPRWKPNIVEPAPNCPRCASSNTKFCYYNNYSLSQPRYFCKACRRYWTKGGFLRNVPVGGGSRKSRRSKTSRPPYNLHSHASSFFNGDHSVADDTSDHSNSNTDIDMALVFAKFLSGQDEVTNASSSSQSHCLTPESLEAENDAPQPSDPVADSSDALIPRDDRSRSTVESFGLMSGIEAAEWESLLGGEQEEVVQDVFWSDGTTSSSVTWQAPPLMQLQEDLEDPIPLNYEEDAQLPVTDAWSWNSFDFSSLQVFSQPP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0294 270 MobiDBLite consensus disorder prediction 132 146 - -
Bisa05g0294 270 ProSitePatterns Zinc finger Dof-type signature. 25 61 IPR003851 GO:0003677|GO:0006355
Bisa05g0294 270 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 151 IPR045174 GO:0003700|GO:0006355
Bisa05g0294 270 MobiDBLite consensus disorder prediction 67 92 - -
Bisa05g0294 270 ProSiteProfiles Zinc finger Dof-type profile. 23 77 IPR003851 GO:0003677|GO:0006355
Bisa05g0294 270 MobiDBLite consensus disorder prediction 132 176 - -
Bisa05g0294 270 Pfam Dof domain, zinc finger 23 77 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0294 Bisa-ChrBisa05 4606410 4607222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0294 14 126 C2C2-Dof Transcription Factor Family AT3G52440 56.897 9.67e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa05g0294 zf-Dof 7.4e-32 No_clan