Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1240 ATGGAGCAAGAAGGAGATGGTGGAGGAGGAGACGTGAATAAGAAACCCCAGCCTCAGCCTCAGCCTCCACCACCACAGACATGCCCTCGCTGTGAGTCTGTAAACACCAAGTTCTGCTATTACAACAATTATAGCCTCTCACAGCCTCGCTACTTCTGTAAAACATGTAGAAGGTACTGGACACAAGGTGGAACCTTGAGGAACGTACCCGTCGGGGGTGGTTGCCGTAAGGGAAAGCGCGGCAAAACGTCGTCCTATTCACAGCTGCAACCTCCGTCGCAAGAGGCGGTGGTCCCAGCACAACGAAATCTGACAAGGACGACGGTCAAAAGGCCCAAAGACCCTCCGGCCGCCTTGGGATCTCCTTCTCAGTCTCCGTCTCCGTCTCCGGCGACGGTTCCGTCGATCCTCCCCTATCCTCAAGTCGGTGGCTATCTGTCTTCTCTGGCGGCGATTCAGTCACTGAACCCATCGCAGCCGTTCAATCCATCTCTGAATCTTGGAGCTGATGCTGTGGGCTCTGGCTCTTCCAACTTGGGTCTTCTTTGTCGGTTCAACGCTGCGTCTCTTGGCTCACAGCGCCAAATTCGTCCATCAGAAATTCTCCAAATGGAAAACAGATCAAGGGAGATAGAATATCAGTATAGAGCAGAACAAGGCTCTGCTTCTCACCATGGTTGGTCCCAAAGCTTCATCAATAATGCTAGCCACACGGCTCCTGATGCCTCTTTGTGGTGTACAATGAGCACCACTTCAATTGGTGATCATACTTCTGGGATTAATAATAATACTGCTGCTGCTTCGTCTTCTGTGATCCCGAATCAATGGCCTGACCTGCCAGGGTTTTGCCCTCCTCCATGA 861 0.5203 MEQEGDGGGGDVNKKPQPQPQPPPPQTCPRCESVNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRGKTSSYSQLQPPSQEAVVPAQRNLTRTTVKRPKDPPAALGSPSQSPSPSPATVPSILPYPQVGGYLSSLAAIQSLNPSQPFNPSLNLGADAVGSGSSNLGLLCRFNAASLGSQRQIRPSEILQMENRSREIEYQYRAEQGSASHHGWSQSFINNASHTAPDASLWCTMSTTSIGDHTSGINNNTAAASSSVIPNQWPDLPGFCPPP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1240 286 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Bisa04g1240 286 MobiDBLite consensus disorder prediction 81 106 - -
Bisa04g1240 286 MobiDBLite consensus disorder prediction 67 134 - -
Bisa04g1240 286 Pfam Dof domain, zinc finger 26 80 IPR003851 GO:0003677|GO:0006355
Bisa04g1240 286 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Bisa04g1240 286 MobiDBLite consensus disorder prediction 1 28 - -
Bisa04g1240 286 MobiDBLite consensus disorder prediction 119 134 - -
Bisa04g1240 286 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 208 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1240 Bisa-ChrBisa04 37935673 37936533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1240 21 180 C2C2-Dof Transcription Factor Family AT4G21050 41.975 1.65e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa04g1240 zf-Dof 3.6e-32 No_clan