Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1532 ATGGGATATACAGTTTTAACATCTTCCCAGAGTTGGACGCCAAGACAAGCGGTGATTTTGGAGGAAATGCAGGAAATACATTCTATCGGAGGAGGTAGATTTTTCGACGGGGGCAGTGGAGACGGGGGCGGAGACCGGAGGCTGAGGCCACACCACCAGAGCAACCAGCAGAACCAGCAGGCCTTGAAGTGCCCAAGGTGCGACTCCCTCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAAGAGCTGCCGGAGATACTGGACCAGGGGCGGCGTCCTCCGCAATGTCCCCGTCGGCGGTGGCTGTCGGAAATCCAAGCGCTCCAAGCCCAAGACATCCTCCTCATCGGAAACGGTAATCAGGGCAGCTCCTCCGCCACCGCCTCCGTCGACAACGCAGCCGTCGAACCAAGATCAGCATAAGTCGAACTCTCATTCCAGCAGCGAAAGCTCCAGCCTCACCGCCGCCGCCACGGAGGCGGCATCGGTGCCGTCGTCGTCGAACTGTGAGCTGTTCAATAATCACAGTTCGAACCCCAATTTCGAGTCCGGCCTGATGGAACAAGCAGGGGATTCTGGTATTTTCTCGGAGATAGGGAGCTTCTCGAGCATGATCAGTGCGACGAACGAGGCATTGTCGTTTGGATTCGGGAACATTCCGGAGATGTCGTCGTTTCGGTTTGGAGGTAATACCGCCACTCAGCAGGGAGGGATGGGGAGTGAGTTACTATCAGGTGAATGGCAGGCACAGCAGGAGATGGAGATGAGTGATGTCGTTCCTCCTCAGCAGGGGTTGAAGTTGCCGGAGATCATGTCGAGGCCGTTGCTTGATCAGACGGTGCCGGTTGATTTGTCGGAGTTGCAGAGTAAAACAGACAACGGAGGTTTCGGGTTGTTGGATTGGCAGGGAGCCGCGGATCAAGGTTTGTTTGATCTTCCTAACACCGTAGATCATGCCTACTGGAGTCACGCTCACTGGACTGATCATGACAATCCTGGTGGTCTCTTTCATCTTCCTTGA 1047 0.5501 MGYTVLTSSQSWTPRQAVILEEMQEIHSIGGGRFFDGGSGDGGGDRRLRPHHQSNQQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGVLRNVPVGGGCRKSKRSKPKTSSSSETVIRAAPPPPPPSTTQPSNQDQHKSNSHSSSESSSLTAAATEAASVPSSSNCELFNNHSSNPNFESGLMEQAGDSGIFSEIGSFSSMISATNEALSFGFGNIPEMSSFRFGGNTATQQGGMGSELLSGEWQAQQEMEMSDVVPPQQGLKLPEIMSRPLLDQTVPVDLSELQSKTDNGGFGLLDWQGAADQGLFDLPNTVDHAYWSHAHWTDHDNPGGLFHLP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1532 348 ProSitePatterns Zinc finger Dof-type signature. 64 100 IPR003851 GO:0003677|GO:0006355
Bisa02g1532 348 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 51 219 IPR045174 GO:0003700|GO:0006355
Bisa02g1532 348 Pfam Dof domain, zinc finger 60 116 IPR003851 GO:0003677|GO:0006355
Bisa02g1532 348 MobiDBLite consensus disorder prediction 143 168 - -
Bisa02g1532 348 ProSiteProfiles Zinc finger Dof-type profile. 62 116 IPR003851 GO:0003677|GO:0006355
Bisa02g1532 348 MobiDBLite consensus disorder prediction 35 62 - -
Bisa02g1532 348 MobiDBLite consensus disorder prediction 106 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1532 Bisa-ChrBisa02 26691346 26692729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1532 45 348 C2C2-Dof Transcription Factor Family AT5G60850 39.319 3.05e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa02g1532 zf-Dof 4.6e-33 No_clan