Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1434 ATGCTGGAAAGTAGTAGAGATCCTGCAATCAAGCTCTTCGGCCAGAAGATTCCCTTGCCCGGTGAAGGCGACCTTCACATCCCCGCCGCCGTCGACGAGGAGGAAGACTCTGCACCGCTGGTGTCCATGGAGGTGGACAGACGAGAAGGAGAAAAAGATGGTGATGATGGAGAGCGACGCAATTCAGAAGAGGAGAAGGATCCAGAAGACAAGGTTCCTTCAGCTGGAAACTCTCCTGACAAAAAGAAAGAAGCTGATCATCCTCCAAATACAGAAGAGACTAATTTAGACCCATTGCCAGAGTCTAATGTGAATCCCAAAACACCTTCCAAAGATGAAGAGATTGCAAAATCAAAAAGTGGCAACTCAGAGAAGGACCAGAGTGATGCAACCAACACACAAGAGAAAACCCTGAAGAAGCCAGATAAAATACTTCCATGTCCTCGCTGCAACAGCATGGACACTAAATTCTGTTACTACAACAACTACAACATCAATCAGCCTCGCTATTTCTGCAAAGCCTGCCAGAGATACTGGACTGCAGGTGGTACAATGAGGAATGTACCGGTAGGAGCAGGGAGGCGAAAGAACAAGAACTCTGCATCGCATTATCGCCACATCGACATTTCTGAGGCTCTACAAGCAACTAGAAATGATGCTCCAAATGGGACTCATCTTCCTGGCTTAAAAGGCAATGGTAGAGTCCTCAGTTTTGGATTAGATGCACCTATTTGTGATTCTATGGCATCTGTCCTGAATCTTGCAGAGAAGAAGGTCCTAAATGGTGTACGAAATGGGTTCCATAGCAAAAGTGGTGAAAACGGTGGTGATGACTGCTCAAGTGCATCTTCCATTACAGTTTCAAATTCTATGGAAGAAACTGGCAAAAGTGTTTCCCAAGAATCACTGCTCAGAACTAATGGTTTTTCTCCTCAAATTCCATGCCTTCCTGGGGTTCCTTGGCCTTATCCTTGGAATGCTCCAGTTCCTTCACCACCATTGTGTCCTCCGGGATTTCCCTTGTCATTCTATCCTGCAGCTTTTTGGAATTGTGGCGTGCCAGGAAATTGGAGTATACCCTGGTTTCCTCCACACCTCTCTGCTCAAAACCCGAAATCTCCAAGCTCTGCACCTAATTCTCCGACATTAGGGAAGCACTCGAGGGATGGGGACATGATCAGACCAGACTGTCTGCACAAAGAAGAATCACCAAAACAGAGAAATGGGTGTGTTTTGGTTCCCAAAACCTTGAGAATTGACGATCCAAGTGAAGCTGCAAAGAGTTCCATATGGGCAACTCTAGGAATCAAGAATGAATCAGCCAGTGGTGGAGGTATGTTTAAGGCCTTCCAATCAAAGAAGGATGAGAAGAATCATGTCATTGAAACCTCTCCAGCGTTGCGGGCTAACCCTGCAGCCTTATCTAGATCCCTTAACTTCCATGAGAACTCCTGA 1455 0.4625 MLESSRDPAIKLFGQKIPLPGEGDLHIPAAVDEEEDSAPLVSMEVDRREGEKDGDDGERRNSEEEKDPEDKVPSAGNSPDKKKEADHPPNTEETNLDPLPESNVNPKTPSKDEEIAKSKSGNSEKDQSDATNTQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHIDISEALQATRNDAPNGTHLPGLKGNGRVLSFGLDAPICDSMASVLNLAEKKVLNGVRNGFHSKSGENGGDDCSSASSITVSNSMEETGKSVSQESLLRTNGFSPQIPCLPGVPWPYPWNAPVPSPPLCPPGFPLSFYPAAFWNCGVPGNWSIPWFPPHLSAQNPKSPSSAPNSPTLGKHSRDGDMIRPDCLHKEESPKQRNGCVLVPKTLRIDDPSEAAKSSIWATLGIKNESASGGGMFKAFQSKKDEKNHVIETSPALRANPAALSRSLNFHENS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1434 484 MobiDBLite consensus disorder prediction 107 143 - -
Bisa02g1434 484 MobiDBLite consensus disorder prediction 1 145 - -
Bisa02g1434 484 Pfam Dof domain, zinc finger 142 199 IPR003851 GO:0003677|GO:0006355
Bisa02g1434 484 PANTHER CYCLIC DOF FACTOR 2 1 484 IPR045174 GO:0003700|GO:0006355
Bisa02g1434 484 ProSitePatterns Zinc finger Dof-type signature. 147 183 IPR003851 GO:0003677|GO:0006355
Bisa02g1434 484 ProSiteProfiles Zinc finger Dof-type profile. 145 199 IPR003851 GO:0003677|GO:0006355
Bisa02g1434 484 MobiDBLite consensus disorder prediction 268 302 - -
Bisa02g1434 484 MobiDBLite consensus disorder prediction 368 400 - -
Bisa02g1434 484 MobiDBLite consensus disorder prediction 274 302 - -
Bisa02g1434 484 MobiDBLite consensus disorder prediction 40 91 - -
Bisa02g1434 484 MobiDBLite consensus disorder prediction 368 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1434 Bisa-ChrBisa02 24697460 24700123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1434 1 482 C2C2-Dof Transcription Factor Family AT3G47500 48.008 1.88e-127 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa02g1434 zf-Dof 2.5e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1816 08 43272015 43274086 Bisa02g1434 02 24697460 24700123 ECH
Bisa02g1434 02 24697460 24700123 Bisa02g1434 02 24697460 24700123 ECH