Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4192 ATGGCTCGTGGTACTAAGGTGTTACTATTGGTGGCCCTATGCGCTCTTGCGGCCGCATCCCTGGGTGAGGCTCAGACACAGGCCCCCTTCAGCTGCAGCACCGAAGGCAAGACGTGTCGCGCCCTGATCGATTACCAATCCCCAAACCAAACCACCCTGGCCACGATTCAATCCCTCTTTAACGTCTCGCACCTCCTCGACCTACTCGGCGCTAACAACCTCTCTCCGACCACCATGTCAAACCACACCGTCCAGAAGGGCCAAATCCTCAAAATCGCCTTCCCGTGTAAGTGCAGCAACGGCAGCGGCGCCTCCGATCGGATCCCTGAATACGTCATCAAGAAGGACGACACGCTTTCTCACATCGCGCAGGAGATTTTCTCGGGATTAGTGACGTGGCAGAAAATTCAAGAGGTCAATCGCATCGCCGATGTAACCTTGATCCAGCCCGGCCAGAAGGTGCAGATCCCGCTCCCCTGTAGCTGCGATCAGGTGAACTCGATGGATGTTGTTCACTATGGGTACTTTGTGCAGTCGGGGAACACCGTTCAGCAGATTGCTCAAAGGTTCGGCACTACTCAGGAGACGCTTCTCAATCTCAATAACATGACTGATCCTAAGACCCTCCAAGCCGCTCAAATTCTCGACGTTCCCCTCAAAGCTTGTTCCTCCTCGACGGTGAAAAGTGACTCGCCGGACTACCCTCTGCTCGTCGCAAACGGCACTGTCACCTACACCGCCAACGGCTGCGTCAAGTGCAGCTGCGACTCCGCCAGCAACGCCATATTGCAATGCGAGCCATCCCAAGCTGAGCCATACGACTGGTCTACATGTCCATCTATGAAATGTGGTTCTTTCACCATTGGCAACATCACTAATATTACATCTTCCTGCAATCGCACCATCTGTGCCTATGCCGGTTTCAGCAGCCAAGCTATTTCCGCCACTCTTGCTCCCCAGTCCACTTGTCCTGCACCAGCAGGATCAGCAGCATCAAGGATGAGCCACCAAGGCTGGGTTTGGAGTCATCTTTTGATTGCCATTCACCTCATCCTTTTTTCTCTCCATTTTTTGTAG 1077 0.5367 MARGTKVLLLVALCALAAASLGEAQTQAPFSCSTEGKTCRALIDYQSPNQTTLATIQSLFNVSHLLDLLGANNLSPTTMSNHTVQKGQILKIAFPCKCSNGSGASDRIPEYVIKKDDTLSHIAQEIFSGLVTWQKIQEVNRIADVTLIQPGQKVQIPLPCSCDQVNSMDVVHYGYFVQSGNTVQQIAQRFGTTQETLLNLNNMTDPKTLQAAQILDVPLKACSSSTVKSDSPDYPLLVANGTVTYTANGCVKCSCDSASNAILQCEPSQAEPYDWSTCPSMKCGSFTIGNITNITSSCNRTICAYAGFSSQAISATLAPQSTCPAPAGSAASRMSHQGWVWSHLLIAIHLILFSLHFL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4192 358 CDD LysM 111 156 IPR018392 -
Bisa01g4192 358 ProSiteProfiles LysM domain profile. 173 217 IPR018392 -
Bisa01g4192 358 ProSiteProfiles LysM domain profile. 109 156 IPR018392 -
Bisa01g4192 358 SUPERFAMILY LysM domain 110 158 IPR036779 -
Bisa01g4192 358 SUPERFAMILY LysM domain 174 218 IPR036779 -
Bisa01g4192 358 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 7 326 - -
Bisa01g4192 358 Pfam LysM domain 111 157 IPR018392 -
Bisa01g4192 358 Pfam LysM domain 175 218 IPR018392 -
Bisa01g4192 358 CDD LysM 175 217 IPR018392 -
Bisa01g4192 358 Gene3D LysM domain 173 229 IPR036779 -
Bisa01g4192 358 Gene3D LysM domain 109 168 IPR036779 -
Bisa01g4192 358 SMART LysM_2 110 157 IPR018392 -
Bisa01g4192 358 SMART LysM_2 174 218 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4192 Bisa-ChrBisa01 100271522 100274380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4192 9 328 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 46.584 3.60e-88 268