LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g3825	ATGGGTCTGTTGTCAAATCATAGAGGCTCAAGATCAGAGTCTACCCAAGAAGGCATACCAGTTTCTTCAGCTGGTACATCGGCGCCTCCGAAGAAGAAATGGTCCAATTTAATGCCTCTTTTCGTCGCCCTTGTGGTCACTGCAGAGATCGCCTTTTTGGGAAGGCTCGATATGGCGAAGAACGCAGCTATGGTGGATAACTGGACTGACTTGTTCTACTGGTCTCGTGAAGACTTTGCTAGAGATGATTTGGGGGTAGATATGTTAGGTGGGGATCGGAGTTCAGAGTCTGAGAGCTGTGAGGAGTTGTTGGAGAGGGAGGATGCTGTGACGTATTCAAGGAACTTCACGAAGGAACCTGTTTTGGTTATTGGAGCTGAGCAGGAGTGGAGGACATGTGCCGTGGAATGCCAGTTTGGGTCTAATTCAGGTAAGAAACCGGATGCATCATTTGGGTTACCGCAAGGACCTGGAACAGCTAGTGTTCTGCGATCTATGGAATCTTCTCAATACTATGCAGAGAACAATATAGCAATGGCAAGACGGAGGGGATATAACATTGTAATGACAACCAGTCTATCATCCGATGTTCCAGTTGGATATTTCTCCTGGGCTGAGTATGACATTATGGGACCAGTACAGCCAAAAACTGAAGCTGCTCTTGCAGCTGCATTCATTTCCAACTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAAGGTCTCGAAAAATCAAACATCAAGATTGATTCTTATGGTGGTTGCCATAGGAACCGTGATGGAAGAGTGGACAAAGTGGAAACTCTGAAGCGCTATAAATTTAGCTTGGCATTTGAGAATTCAAATGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGATCGATCCCTGTTGTTGTTGGTGCTCCAAATATTCAGGATTTTGCTCCAGCCCCTGGTTCTCTTTTACATATTAAAGAGATAGAAGATGTTGAGTCAGTTGCGAAGACCATGAAATATCTGGCAGAGAATCCTGAAGCATATAACAAGTCACTGAGGTGGAAGTATGAGGGTCCATCTGATTCTTTCAAGGCCCTTGTGGATATGGCAGCAGTACATTCATCTTGCCGCCTTTGCATTCACTTAGCTACAACGATTAGAGAGAAGGAAGAAAAGAGCCCAGTCTTCAAGAACCGCCCCTGCAAGTGCACTAGAGGTTTAGAAACTGTATACCACATATATGTGAGAGAAAGGGGAAGGTTTGAGATGGAGTCCATTTACTTGAGGTCTAGCAATCTGACTCTGGAGACCTTAAAGTCTGCTGTCTTACAGAAGTTCAAATGCCTAAATCATGTACCGATATGGAAGCCGGAAAGACCAGAAAGCATAAGAGGAGGCAATGAACTAAAAATTTACAGAATATATCCTGTAGGCTTGACACAGAGGCAAGCTCTTTATAGCTTCAGCTTCAAAGGGGATGTGGGTTTTAGAAGTCACTTGGAAAGCAATCCTTGTGCAAAGTTTGAAGTCATATTTGTCTAG	1533	0.4423	MGLLSNHRGSRSESTQEGIPVSSAGTSAPPKKKWSNLMPLFVALVVTAEIAFLGRLDMAKNAAMVDNWTDLFYWSREDFARDDLGVDMLGGDRSSESESCEELLEREDAVTYSRNFTKEPVLVIGAEQEWRTCAVECQFGSNSGKKPDASFGLPQGPGTASVLRSMESSQYYAENNIAMARRRGYNIVMTTSLSSDVPVGYFSWAEYDIMGPVQPKTEAALAAAFISNCGARNFRLQALEGLEKSNIKIDSYGGCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGSIPVVVGAPNIQDFAPAPGSLLHIKEIEDVESVAKTMKYLAENPEAYNKSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATTIREKEEKSPVFKNRPCKCTRGLETVYHIYVRERGRFEMESIYLRSSNLTLETLKSAVLQKFKCLNHVPIWKPERPESIRGGNELKIYRIYPVGLTQRQALYSFSFKGDVGFRSHLESNPCAKFEVIFV	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g3825	510	PANTHER	ALPHA- 1,3 -FUCOSYLTRANSFERASE	44	460	IPR001503	GO:0006486\|GO:0008417\|GO:0016020
	Bisa01g3825	510	MobiDBLite	consensus disorder prediction	1	31	-	-
	Bisa01g3825	510	MobiDBLite	consensus disorder prediction	7	23	-	-
	Bisa01g3825	510	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	109	386	-	-
	Bisa01g3825	510	Gene3D	-	164	359	IPR038577	-
	Bisa01g3825	510	FunFam	Glycoprotein 3-alpha-L-fucosyltransferase A	167	359	-	-
	Bisa01g3825	510	Pfam	Glycosyltransferase family 10 (fucosyltransferase) C-term	220	385	IPR001503	GO:0006486\|GO:0008417\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g3825	Bisa-ChrBisa01	92644742	92650486	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g3825	1	510	Xyloglucan Fucosyltransferase1	AT1G49710	67.370	0.0	714