Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3344 ATGGTCTTCCCTTCTCTTCCAGTCTATCATCTAGATCCACCCAATTGGTCTCAACAGCAACCTAATCCGCAGCCAGGAGGAGTAATTCCTACCCAGAATCCTCCGATTATTCTGCCTCCTCCACCGCAGCTGTCGCAGCCACCTTCGGTGGCTGCTGGAGTTGGTGGTGGTGGCGCTACAAGGCCGGGATCAATGGCTGATCGGGCCCGATTAGCGAAAATAGCGCAACCGGAGGTGGCACTGAAGTGCCCACGGTGTGAATCGTCGAACACCAAGTTCTGCTACTACAACAACTACAGCCTGTCGCAGCCCCGGCACTTTTGCAAGACTTGCCGGCGGTACTGGACCCGGGGCGGGGCGCTTAGGAATGTCCCGGTTGGAGGCGGGTGCCGGAGGAAGAATAAGAGAAGCAAAGGAGGAAGCAACACCTCAAAGTCTCCCACCAAAGCAGCATCATCAAATGCAGGTTCAATTGTTTCAAATAATTCTTCCTCTAGCTGTTGCCCTAGCGATCATCATCATCTGATAGCTCATTTGCCATCTTCTCAATTACTCTTCTCTCACAATTATAGTAGCTACGACGACGTTTCTGGAGGCATTAATAATATTAATGCTGAATTTCAATTTCAAACTGGTTCTTCTTCTATGTTATCAAATGGCTTCACTTCAACTCTGCAACATCAACAGTTTCCTTTTTTGGCTAATTTGGAAGCACCAATTGGGATGTATCATCAGTTTGAAAGATCAGAAAATATTGTTCCTGAAGCTGAACCATCAAGGAGTAGTCCTTTGTTATATTCAGGTGGTAGTGGAATGGTAGGCACTGATCATCATCAGGTTAGTAGTACTACAGTTAAACCGGAGGAAAATGTTCAAGTGTTCGGTATGTCCAAGAGTCTTTTCGGAAACTTAGGAAATAATAATGAACAGTTCTGGGATGCAAATAGTGGCAATGCATGGAATATTGACAATAATATTCCCAGTTTCACCTCTTCTTCCCTCACTCATCTCATGTGA 1017 0.4612 MVFPSLPVYHLDPPNWSQQQPNPQPGGVIPTQNPPIILPPPPQLSQPPSVAAGVGGGGATRPGSMADRARLAKIAQPEVALKCPRCESSNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRKNKRSKGGSNTSKSPTKAASSNAGSIVSNNSSSSCCPSDHHHLIAHLPSSQLLFSHNYSSYDDVSGGINNINAEFQFQTGSSSMLSNGFTSTLQHQQFPFLANLEAPIGMYHQFERSENIVPEAEPSRSSPLLYSGGSGMVGTDHHQVSSTTVKPEENVQVFGMSKSLFGNLGNNNEQFWDANSGNAWNIDNNIPSFTSSSLTHLM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3344 338 ProSiteProfiles Zinc finger Dof-type profile. 81 135 IPR003851 GO:0003677|GO:0006355
Bisa01g3344 338 Pfam Dof domain, zinc finger 80 135 IPR003851 GO:0003677|GO:0006355
Bisa01g3344 338 MobiDBLite consensus disorder prediction 27 47 - -
Bisa01g3344 338 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 74 243 IPR045174 GO:0003700|GO:0006355
Bisa01g3344 338 MobiDBLite consensus disorder prediction 12 26 - -
Bisa01g3344 338 MobiDBLite consensus disorder prediction 12 63 - -
Bisa01g3344 338 MobiDBLite consensus disorder prediction 140 157 - -
Bisa01g3344 338 ProSitePatterns Zinc finger Dof-type signature. 83 119 IPR003851 GO:0003677|GO:0006355
Bisa01g3344 338 MobiDBLite consensus disorder prediction 125 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3344 Bisa-ChrBisa01 78254684 78255877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3344 1 138 C2C2-Dof Transcription Factor Family AT2G37590 58.503 4.20e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa01g3344 zf-Dof 4.5e-32 No_clan