Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3047 ATGTCCCTTCTCAGCAGATTCTTTTACAGGAGACCGCCAGATGGTTTGCTTGAATTTGTCGATAGAGTATACGTTTTCGATTCCTGCTTTTCCACCGAGGCATTGCCTGATGGAATGTACCAAATATATTTGCACGAAATCATTACCGAGTTACATGAAGAATTTCCGGAGTCTGCCTTTTTCGCTTTCAATTTTCGTGAAGGAGAGAAACGTAGCCATTTTGCTGAAATTCTTTGTGAATATGATGTTACTGTGATGGATTATCCGCGGCAGTATGAGGGATGCCCTATTCTTCCGTTGTCGTTGGTTCAACATTTTCTTCGTGTTTGTGAGAGCTGGCTTTCACTTGGGAATCAACAAAATGTTATCCTCCTCCACTGTGAGAGAGGAGGTTGGCCTCTCTTGGGGTTTCTTTTAGCTAGCTTTCTCATTTATAGGAGACTACACAGTGGTGAGCGAAAAACACTTGAAATGGTGCATAGAGAGGCACCCAAAGGTTTCTTACAGCTGTTGTCGCCTTTAAACCCAATGCCATCTCAGCTTCGTTATGTTCAGTATGTAGCACGAAGGAACATAGCTCCTGAGTGGCCACCTCCTGAGCGAGCTCTTTCTCTAGATTGTGTCATTCTCAGAGCTATCCCAAGTTTTGATTCCCAGAACGGATGCAGACCCATGATCCGCATATTTGGTAGGAATCTTCTCAGCAAGGGTGGGCTTTCAACCCAGATGCTCTACTCCATGCACAAGAAAAAGAAAACATTAAGACACTATCGCCAGGTAGACTGTGATGTGATCAAGATTGATATTCAATGTTTAGTACAAGGAGATGTTGTGTTGGAGTGTGTCCATTTGGAGTTAGATCCGGAAAGGGAAGTAATGATGTTTCGTATAATGTTCAACACAGCATTTATTCGATCTAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGATTCAAAAGAGCGGTATCCAAAAGGCTTCCGAGCAGAGGTCTTATTTGGGGAGGTTGAGAGCATATCTCCTCCAAGAGCACCAACAACCATGCTAAATGGTGAGGAGAAAGGTGGATTGCCCATTGAAGCTTTTTCAAGGGTTCAAGAACTTTTTAGTGGTGTGGAGTGGCTTGACAGTGGTGAAGATGCAGCTGTCTGGTTGCTTAAACAACTTTCTGTGCTAAATGATGTCAAAGAGCTTTCAAGGCTGCAAGGCAAAGCAAGTTGGTACTCATCACCTGCTGACTCTGAAGATGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAAGCTTTTGATGTTATTCCAAAGGCTTCTACTGATATGTCGAAATTATTGGCACCTGATAACTCTGAATCAGTCAATTTAGCTTTTGAAAGTGAAGGCAGAGATAGTGTACACCTCACTTCAAGACCTCCTGATTCATCATTGATTGAAAGTGTTCCATCTCATCATGCTCAAAGTAAAGAAAATCCCCCCTATTTGTCTCCACCTGTTCTTGCAACTCAATCTCTGCCAACAACACTGGCACCATTACCACCTCCTCCTCCACCAATGCCTTACTCTAGGTCTTCTCCACCACCTCCTATGATAGCCAAAATTGGGCCTCCTCCACCACCTCCTCCTCCACCTCTTCCACATCTTTCTAATACTAAAAAAGATACTTTGACACCTTTGGCAGCATCTTCAGATACTAGCAAGGGCCCACCACCACCCCCTCCACCGCCACCTCCTCCATTACCCCCATTTGTCTCTTGCAAACCTCCACCTCCACCGCCGCCCCCACCACCCCCTTTTACATCCACTATTAATCAACAAACCTCAACACCACCACCACCACCACCACCACCACCACCACCACCACCACCACTTCCTCCCCCATCCCCACCATCATCCGTTGTGGGAAGTACAACGAACAAGGTGTCACAACCACTGCCGCCACCACCACCATTGCCACCTTTATCATCAAATATTTCAACTTCATCTAATACTAAACCTATGCAAGGGGCAAAACCTCCACCATCACCACCTCCACCTCCACCACCTCCCCCTCCCTTAAGCCAGAATGCTAGCAATGCTTCTAGATTACCTCCGCCTCCGCCTCCACCTCCCCCACCCCCTCCTCCTCTAGCTCATAGTACTCTTAAACCACCTCCACCTCCCCCACCTCCTCCTCCTCCTCCAACTCATAGTGCTCTTAGACAACCTCCACCTCCACCACCACCTCCTCCTCTAGCTCAAAATGCTCTGAGACCACCTCCACTAGGACCTATCCGATTGGGTTCAGTTCCCCCACCTACCCCAATGATGCCAAAGCCTCCAAATGCACCTCCACCGCCTAGTCGGGGTGCACCACCACCTCCACCTCCACCTCCACCTCCACCTGGACCTGCCCGATCAGGTTCAATTCCCCCACCTCCCCCTCCGGTGCCAAAGCCTCCAAATGCACCTCCTCCACTCAATCGTGGTGCAGCACCACCTCCACCTCCACCTCCTACAGCCAAGGGATTTGGTGTGCCACCACCACCACCCCCGTCTATTGGAAAAGGAAAAGCTTCTCCAGCATCAATTAATGTTGGAAGAGGTCGAGTATCTAGTGGGACTGTTATTCCCCCTAAGAAAGCTTCATTAAAGCCCTTACATTGGGTGAAAGTTACTCGAGCAGTGCAAGGGAGTTTATGGGCTGATTCACAGAAACAAGATAATCAATCAAGGCCTCCTGAAATAGATATATCAGAACTTGAGAGTCTGTTTTCAGCAGCATCTGCATCTGATGGGAGCAGTACTAAAGGTGTAGGCCGGCGTGGTTCTAATATTAACAAACCTGAGAAAGTACAATTGATTGACTTGCGAAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAATGCAGTTCTGGCCTTGGATTCTTCTGCTTTAGACATTGATCAGGTTGAGAATCTGATTAAGTTCTGTCCAACAAAGGAAGAAATGGAGATGTTGAAGAATTACACTGGGAAGAAGGAAATGCTTGGGAAGTGTGAACAGTTTTTCATGGAGCTGATGAAGGTTCCACGAGTAGAATCTAAGTTACGAGTATTTGCTTTTAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATTAAATTTGAACACAATCAATGATGCTGCTAGAGAGGTGAAAGAATCTATGAAGTTGCGTCAAATTATGCAGACTATTCTTACCTTGGGTAATGCCTTAAATCAGGGAACAGCACGAGGATCTGCAGTAGGATTTAAATTGGATAGCCTTCTTAAATTATCTGATACTCGAGCAAGAAATAACAAAATGACTCTCATGCATTATTTGTGTAAGCTTCTTTATGAGAAAATGCCAGAATTGCTAGATTTTGGCAAGGATCTTGTTCATTTAGAAGCAGCTTCTAAGATCCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTCTTGAGAAAGTTGAACAAGAACTTACTGCTTCGGAAAATGATGGTGCTATATCTGCAGGATTCCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGAAGTGAGGATACTTATATCATTGTATTCTGAAGTGGGAAGAAATGCAGATTCCTTGTCGCAGTACTTTGGGGAAGATCCGGCTCGGTGCCCATTTGAGCAAGTGACACAAATCCTGGTTGTCTTTGTAAAGATGTTCAACAAGTCAAGGGAGGAGAACGAAAGGCAAGCAGATGCCGAAAAGAAGAAATTAGAGAAAGAAGCCATGAAGGAACAACGGACACCGGTTAATACGCATTCAAGAAAAGATGGTATTCAGTAG 3852 0.4491 MSLLSRFFYRRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQIYLHEIITELHEEFPESAFFAFNFREGEKRSHFAEILCEYDVTVMDYPRQYEGCPILPLSLVQHFLRVCESWLSLGNQQNVILLHCERGGWPLLGFLLASFLIYRRLHSGERKTLEMVHREAPKGFLQLLSPLNPMPSQLRYVQYVARRNIAPEWPPPERALSLDCVILRAIPSFDSQNGCRPMIRIFGRNLLSKGGLSTQMLYSMHKKKKTLRHYRQVDCDVIKIDIQCLVQGDVVLECVHLELDPEREVMMFRIMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVESISPPRAPTTMLNGEEKGGLPIEAFSRVQELFSGVEWLDSGEDAAVWLLKQLSVLNDVKELSRLQGKASWYSSPADSEDENNESSTADSSDEAFDVIPKASTDMSKLLAPDNSESVNLAFESEGRDSVHLTSRPPDSSLIESVPSHHAQSKENPPYLSPPVLATQSLPTTLAPLPPPPPPMPYSRSSPPPPMIAKIGPPPPPPPPPLPHLSNTKKDTLTPLAASSDTSKGPPPPPPPPPPPLPPFVSCKPPPPPPPPPPPFTSTINQQTSTPPPPPPPPPPPPPPLPPPSPPSSVVGSTTNKVSQPLPPPPPLPPLSSNISTSSNTKPMQGAKPPPSPPPPPPPPPPLSQNASNASRLPPPPPPPPPPPPPLAHSTLKPPPPPPPPPPPPTHSALRQPPPPPPPPPLAQNALRPPPLGPIRLGSVPPPTPMMPKPPNAPPPPSRGAPPPPPPPPPPPGPARSGSIPPPPPPVPKPPNAPPPLNRGAAPPPPPPPTAKGFGVPPPPPPSIGKGKASPASINVGRGRVSSGTVIPPKKASLKPLHWVKVTRAVQGSLWADSQKQDNQSRPPEIDISELESLFSAASASDGSSTKGVGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSALDIDQVENLIKFCPTKEEMEMLKNYTGKKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLRLNLNTINDAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLYEKMPELLDFGKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISAGFRKVLKNFLDIAEAEVRILISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEAMKEQRTPVNTHSRKDGIQ 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3047 1283 MobiDBLite consensus disorder prediction 471 492 - -
Bisa01g3047 1283 MobiDBLite consensus disorder prediction 552 566 - -
Bisa01g3047 1283 Pfam Formin Homology 2 Domain 873 1244 IPR015425 -
Bisa01g3047 1283 Gene3D Formin, FH2 domain 870 1255 IPR042201 -
Bisa01g3047 1283 SMART it6_source 537 1280 IPR015425 -
Bisa01g3047 1283 PANTHER FORMIN-J 787 1270 - -
Bisa01g3047 1283 MobiDBLite consensus disorder prediction 462 875 - -
Bisa01g3047 1283 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Bisa01g3047 1283 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Bisa01g3047 1283 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Bisa01g3047 1283 MobiDBLite consensus disorder prediction 567 634 - -
Bisa01g3047 1283 SUPERFAMILY Formin homology 2 domain (FH2 domain) 829 1263 - -
Bisa01g3047 1283 Coils Coil 1150 1177 - -
Bisa01g3047 1283 MobiDBLite consensus disorder prediction 671 851 - -
Bisa01g3047 1283 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 20 187 IPR029021 -
Bisa01g3047 1283 Gene3D - 197 342 - -
Bisa01g3047 1283 MobiDBLite consensus disorder prediction 1246 1283 - -
Bisa01g3047 1283 SMART PTEN_C2_2 198 338 IPR014020 -
Bisa01g3047 1283 MobiDBLite consensus disorder prediction 409 433 - -
Bisa01g3047 1283 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Bisa01g3047 1283 MobiDBLite consensus disorder prediction 510 550 - -
Bisa01g3047 1283 Coils Coil 1048 1068 - -
Bisa01g3047 1283 FunFam Formin-like protein 867 1255 - -
Bisa01g3047 1283 Coils Coil 1244 1271 - -
Bisa01g3047 1283 ProSiteProfiles Formin homology-2 (FH2) domain profile. 869 1269 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3047 Bisa-ChrBisa01 66507480 66518241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3047 1 439 FH2 protein (formin) Gene Family AT1G31810 76.765 0.0 767