Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1783 ATGTCGGAGGTTAAAGACCCCGCGATTAAGCTTTTTGGGAGGACGATTTCTCTGCCACTCAATCGCCACGTCTCCTCCCTTAATGATTCCTCTGAAGATGATCACAGTCGTCCTTCGTCTTCGTCGTCCCCGCGTGAAGTGAGTTCTGGAATACACCAACAACCACAGGGGGTTCAGGTTCAGGAACTGCCAAGGAAAGAACTCACCTCACAAGATGATGATGCCTCATATCAAAGCACAGAGGATTTAAAATCTCCCACAGCATCTTCAGGCATTTTTGACAATCCTAAGACTCCCTCTTCAGAAAGAGAATCTTCTTTACTCAAATCTTCAAAACACGGAGAACAAAGTGAGACAAGCAATTTAGAAGAAAAAACTCTGAAGAAGCCTGACAAGATACTCCCATGCCCGAGATGCAATAGCATGGACACCAAATTTTGTTATTATAACAATTACAATGTCAATCAGCCCCGTCATTTCTGCAGGAACTGTCAGAGATATTGGACAGCTGGAGGAACCATGAGAAATGTGCCTGTAGGCGCTGGTCGTCGCAAGAACAAAAACTCTTCTGCCTCACAGTATCGTCACATAATGGTTCCAAAGGCTCTTCAAATTGCGAAAGACAACTCTGCCAATGTATCACATAATGCTGTTTTGGGAAATAGAACAGCTGTCTTGACTTTCGGATCAAATTCTCCTCTTTGTGATTCCATGGCTTCTGCATTGAACCTTGCAGAGAAAACACACAATGGTGTTTTAAATGGTTTTCATTTACCCGAGCAGAATACTTTTGTATCTAATGGTAGAGAAGATACGGGGAATGATCACTCCATTGGAGCTTCTGTTACAGCTTCAACTTCATCTGAGAAGAACGGCAACACTGCCTTCCAAGTACGGGGGGATAAAATTAATCAAGGTTTCCCTCCTCAATTGCCATGCTTCCCAGGTTCCTCCTGGCCTTATCCATGGAACTCGGCGCAGTGGAGTTCTATGGTGCCTCGTCCTCCTCCATTCTGCCCACAAGGCTATCCAGTATCATTCTATCCCAATCCTACATATTGGGGTTGCACTTTACCAGCTTCCTGGAATGCACCATCCATCTCTGCCCAATCTTCTGTTAACCACTCTTCTCCTAGCTGTGGCTCTAATTCACCTACTCTGGGAAAACACTCAAGGGAAGGCAACATCCTCAGTCCAGTCAACTCACCGAAAGAAAAGCCTGATATAGAGAGCAACAATAAAGAAAATAGTGTCTTGACCCCCAAGACTCTGAGAATCCATGATCCCAGTGAAGCTGCAAAGAGTTCTATATGGTCAGCACTAGGGATAAAAAATGACAAGGCCAATTCTCTCAATGGAGGAGGCCTTTTCAAGGCATTTCCGGCTAAGGGAGATGACAAGAATCTTGCCGTTGAACCATCTCTTTTGTTGCAAGCCAACCCTGCAGCTTTATCACGATCCCTTACTTTCCGTGAGCAGACATAA 1485 0.4485 MSEVKDPAIKLFGRTISLPLNRHVSSLNDSSEDDHSRPSSSSSPREVSSGIHQQPQGVQVQELPRKELTSQDDDASYQSTEDLKSPTASSGIFDNPKTPSSERESSLLKSSKHGEQSETSNLEEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCRNCQRYWTAGGTMRNVPVGAGRRKNKNSSASQYRHIMVPKALQIAKDNSANVSHNAVLGNRTAVLTFGSNSPLCDSMASALNLAEKTHNGVLNGFHLPEQNTFVSNGREDTGNDHSIGASVTASTSSEKNGNTAFQVRGDKINQGFPPQLPCFPGSSWPYPWNSAQWSSMVPRPPPFCPQGYPVSFYPNPTYWGCTLPASWNAPSISAQSSVNHSSPSCGSNSPTLGKHSREGNILSPVNSPKEKPDIESNNKENSVLTPKTLRIHDPSEAAKSSIWSALGIKNDKANSLNGGGLFKAFPAKGDDKNLAVEPSLLLQANPAALSRSLTFREQT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1783 494 MobiDBLite consensus disorder prediction 73 105 - -
Bisa01g1783 494 ProSiteProfiles Zinc finger Dof-type profile. 134 188 IPR003851 GO:0003677|GO:0006355
Bisa01g1783 494 ProSitePatterns Zinc finger Dof-type signature. 136 172 IPR003851 GO:0003677|GO:0006355
Bisa01g1783 494 MobiDBLite consensus disorder prediction 368 418 - -
Bisa01g1783 494 Pfam Dof domain, zinc finger 131 188 IPR003851 GO:0003677|GO:0006355
Bisa01g1783 494 MobiDBLite consensus disorder prediction 13 126 - -
Bisa01g1783 494 MobiDBLite consensus disorder prediction 368 398 - -
Bisa01g1783 494 MobiDBLite consensus disorder prediction 41 65 - -
Bisa01g1783 494 MobiDBLite consensus disorder prediction 106 126 - -
Bisa01g1783 494 PANTHER CYCLIC DOF FACTOR 2 1 493 IPR045174 GO:0003700|GO:0006355
Bisa01g1783 494 MobiDBLite consensus disorder prediction 266 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1783 Bisa-ChrBisa01 30665585 30668675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1783 4 492 C2C2-Dof Transcription Factor Family AT5G39660 38.772 9.19e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa01g1783 zf-Dof 3.7e-32 No_clan