Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1532 ATGGAATTTGAGGATCAAGAGGAGCAAGAGGAAGAGCTGGGGATGGAGTCGTTGGGGATGTCTTCTTCGCGAGTGAAAATGCAGAGTTCGGGAGGTGCAGGGGAAGCCATGCCCATGATGATGCCTCAGCCTACCAGGGGTAGTAATTACATCGGTAAGGGCAGGTATAGGGAGTGCCTGAAGAACCACGCGGTGAGTATTGGAGGTCACGCGCTGGACGGATGTGGAGAGTTCATGGCGGCCGGAGCTGAAGGCACACTTGACGGTCTGAAATGCGCCGCCTGTAACTGCCACCGTAATTTCCACCGCAAGGAGACTGACTCTTACATGTTGACCCCCCAGCACCACCACCCGCCACCGCATTTCGCCGCTGCCGCATATTATCGGGGGCCGGCGGGATATTTACACGTGGCGGGGCAGCAGAGGGGGACGGGGATGACGCTGGCGCTGCCGTCGACGTCGGGAGGCGGGGGCGGGACGCAGAGCACGAGGGACGAGCAGGACGACGACGTTTCGGACCCAAGTGGAGGAGGGGGGTCGAAGAAGAGGTTCAGGACGAAGTTCACGCAGGAGCAGAAGGACAAAATGCTGGGGTTGGCGGAGAGATTGGGGTGGAGGATTCAGAAGCAGGACGAGGCGGTGGTGCAGGAGTTCTGTAACGATACTGGGGTGAAGCGTCAGGTTCTTAAGGTTTGGATGCACAACAACAAGCACACTCTGGGTAAGAAGCCCTAG 735 0.5864 MEFEDQEEQEEELGMESLGMSSSRVKMQSSGGAGEAMPMMMPQPTRGSNYIGKGRYRECLKNHAVSIGGHALDGCGEFMAAGAEGTLDGLKCAACNCHRNFHRKETDSYMLTPQHHHPPPHFAAAAYYRGPAGYLHVAGQQRGTGMTLALPSTSGGGGGTQSTRDEQDDDVSDPSGGGGSKKRFRTKFTQEQKDKMLGLAERLGWRIQKQDEAVVQEFCNDTGVKRQVLKVWMHNNKHTLGKKP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1532 244 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 56 105 IPR006456 -
Bisa01g1532 244 FunFam Zinc-finger homeodomain protein 2 169 242 - -
Bisa01g1532 244 Gene3D - 166 242 - -
Bisa01g1532 244 NCBIfam homeobox domain, ZF-HD class 181 237 IPR006455 -
Bisa01g1532 244 SUPERFAMILY Homeodomain-like 168 242 IPR009057 -
Bisa01g1532 244 MobiDBLite consensus disorder prediction 146 162 - -
Bisa01g1532 244 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 55 105 IPR006456 -
Bisa01g1532 244 MobiDBLite consensus disorder prediction 146 189 - -
Bisa01g1532 244 Pfam ZF-HD protein dimerisation region 55 106 IPR006456 -
Bisa01g1532 244 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 53 240 - -
Bisa01g1532 244 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1532 Bisa-ChrBisa01 25997527 25998261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1532 52 240 ZF-HD Transcription Factor Family AT4G24660 54.497 8.15e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa01g1532 ZF-HD_dimer 6.3e-29 No_clan