Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01360 ATGCACAATTCAAAGCTAGCAGTATCTCTTCTCATACGATATGTGAACTCAGTTCAAGCTCGCAATTTTCCCTTTAATACCCGTGATAGTATCCCTTCAAGGGCGCTCAGCAAATATCAAGCTTGGCTTTATTCCGTATCCAATAGCAATTCCCTCAACGCCAAGCGTCTGTTTTCTGGATACGCCCTTGAACAGTTCTCCGATGATGAGTATGAGTGTGAATTCGAGAACCAGCAGGCATCATCTACTGTGGTAAATGTTGACGAGTGGAAATGGAAACTCAGCTTACTGTTACGCAGTGAAAAGGACCAGGAAATTGTATCTAGAGATAGAAAAGATAGGAGAGATTATGAGCAGATATCTAGCCTTGCTAAAAGGATGGGGCTTTACAGTGAACTGTATGGAAAAGTGGTGGTAGCAAGTAAGGTGCCTCTTCCTAACTACCGGCCAGATTTGGATGATAAACGTCCACAAAGAGAGGTGGTGATCCCGCTAAGCTTGCAAAGGAGGGTTGAGAGTTTGTTGCAGGAACACCTTGATAGACTTCAGTTGAATTCTGGAAAGATCATTGGCGATTCAGATGATGTCAAGTCTATGAATCAGACAAATGATGTAGATATGGACGAGAATGCTGATTCTTTTGTGGATGAAGCTGTTATGGAAAAGGTTCTTCAGAGGAGGAGCTTAAGGATGCGTAATATGCAAAGAACTTGGCAGGAATCACCTGAAGGCAAGAAGATGCTGGAATTTCGGAAGTCTCTGCCAGCATTCAGGGAGAAGGAAGGCTTACTTCAAGCCATAGCAAGAAATCAGGTGATAGTGATATCTGGAGAGACTGGCTGTGGTAAGACCACTCAACTTCCACAATATGTATTGGAGTCACAGATAGAGTCTGGCCGTGGAGCATTTTGCAATATAATTTGCACACAGCCTCGGAGGATATCTGCTATGGCTGTGGCAGAGAGAGTGTCAACGGAGAGAGGAGAGCCTCTTGGTGAAACAGTTGGTTACAAAGTTCGATTAGAGGGAATGAGAGGGAAAAACACCCATCTGCTTTTTTGTACCAGCGGTATATTACTTCGGCGGCTGCTGAGTGATCGCAACCTGAATGGTATAACTCATGTTTTTGTTGATGAAATTCATGAGCGAGGCATGAATGAAGACTTCCTTCTAATTGTGTTGAAGGATCTTCTGCCACGTCGTCGAGATTTAAGACTGGTTTTAATGAGTGCCACTTTGAATGCTGAGCTTTTTTCGAATTATTTTGGAGGTGCACCAACATTTAATATCCCTGGTTTCACCTATCCTGTGAGAGCTCACTTTTTGGAAGATGTTTTGGAAATAACTGGATATAAGTTGAGTCCATTCAATCAAATTGATGATTATGGTCAAGATAAAATGTGGAAAACACAAAGACAGATAGCACCACGGAAAAGGAAAAATCAGATCACTTCTCTTGTTGAGGAAGCTCTCTCTAAATCAAGCTTTGAGAATTATAGCTCTAAGGCACGTGATTCACTTGCGTCTTGGGCACCTGACTGTATAGGATTTAATCTCATTGAGGCTGTTCTATGCCACATATGTCGGAAGGAAAGACCAGGTGCTGTCCTTGTATTCATGACAGGGTGGGAGGATATAAGTTGTTTAAGAGATCAGCTTAAAGCTCATCCTCTCTTAGGAGATCCAAATAGGGTTCTGCTTCTAACTTGCCATGGTTCAATGGCAACTTCTGAACAGAAACTTATATTTGAGAAACCACCTCCAAATGTAAGAAAAGTAATCCTTGCAACAAATATGGCAGAAGCAAGTATTACAATCAATGATGTAGTTTTTGTAATTGATTGTGGAAAAGCAAAAGAGACCACTTACGATGCCTTGAATAATACACCGTGTCTTCTACCATCTTGGATATCACAAGCGTCTGCTCGGCAGAGAAGGGGTAGGGCTGGTCGTGTGCAGCCAGGGGAATGCTACCATCTCTACCCCAAATGTGTTTATGAAGCTTTTTCTGAATATCAGCTCCCTGAGCTATTGAGAACACCTTTGAACTCTCTCTGTTTGCAAATAAAAAGTTTAGAGGTTGAGAGCATAGGAGAGTTCTTATCAGCAGCTCTACAGGCACCAGAGCCACGCACTGTCCAAAATGCTATTGATTTTCTCAAGATGATTGGAGCATTAGATGAAAAGGAAAATCTTACTAATCTTGGGAAGTTTCTGTCCATTCTCCCAGTTGACCCCAAGCTTGGAAAAATGCTAATAATGGGAGCTATATTTCGCTGCTTTGACCCTGTTCTTACAGTAGTTGCTGGTCTTAGTGTCAGGGATCCTTTCCTTTTGCCCCAAGACAAGAAGGATTTGGCAGGGACAGCAAAGTCTAGATTTTCTGCTAAAGATTACAGTGATCATATGGCTCTTGTTCGTGCTTACGAAGGATGGAAAGATGCAGAAAGAGAAGGATCTGCTTATGAATACTGTTGGAGAAATTTCCTCTCTGCCCAGACTCTTCAGGCTATACGGTCTCTTCGGAAGCAGTTTAGTTTCATCTTGAAAGACTCTGGCTTGATAGATGAAGATGCAAGCATTAACAACAAATTGAGTCACAATCAGTCACTGGTTCGTGCTGTCATATGTTCTGGCCTCTTTCCGGGCATAGCATCCGTGGTGCATCGGGAAACATCCATGTCTTTCAAAACGATGGATGATGGCCAAGTTTTATTATATGCAAATTCGGTGAATGCACGTTACCAAATAATTCCCTACCCTTGGCTGGTTTTTGGTGAAAAAGTCAAGGTCAATGCTGTTTTCATACGTGATTCCACTGGTGTGTCAGATTCAATACTTATCCTTTTTGGCGGTGCTCTGAAAAGTGGGATACAGGCTGGGTATCTCAAGATGTTGGAAGGGTACATTGACTTATTCATGGATCCTAGTTTAGCAGACTGCTATTTGAAGCTTAAGGAGGAGCTTGATAAGCTTATCCAAAAGAAGCTTGCAGATCCTATCATTGACATTCACAAGGAAGGAAAGTACTTGATGCATGCTGTTCAGGAACTGGTTTCAGGTGATCAAAGTGAAGGAAGATTTGTATTTGGCCGTGAAAGCCGGAAGCCTCGGGCATCAAGTGATGAGAGTAACTTCACAAAAGATGGGACAAACCCCAAAAGCTTGCTGCAAACGCTACTTATGCGAGCAGGGCACTCCCCGCCAAAGTACAAAACAAAACACCTCAAGACAAATGAGTTCAGGGCACTGGTGGAATTCAAAGGAATGCAATTTGTTGGAAAACCCAAGAGAAACAAGCAGCTTGCAGAAAGGGATGCTGCCATAGAGGCATTGGCCTGGTTGACTCACACTTCTGACAATCATCGGTTCCAAGACAATGGCTCTCAGCCAGATGTCACTGACAACATGCTAAAACTGCTTGGGAAACGAAGAAGATCGAAGGGTCGCAAGGGTTGACAGGTTATCATCTTTGAATGGTATTTATTATTATGTTTCTTTTTTGAGTTTTGAAAAGGATAGTAAGGATAAGCTTCTCCAATATTACCAGACAGGATGCTAGTGGCATACTTTAGATGGTTTCTAAGTGATTCTGTCCCATCCCATTTTTCTCCTCTGTTGTATTAGTAACCTTGTACAACATCATAGGGCTGCTTATCTTTGAGAGACTGGAGCATACTTTTTAATGGATGACATATACAGAGAAAAGTATCTGAGTATGACGTTCTGCTGAAAGCAGGACCGAATTCCGGCTTTAGCATT 3762 0.4237 MHNSKLAVSLLIRYVNSVQARNFPFNTRDSIPSRALSKYQAWLYSVSNSNSLNAKRLFSGYALEQFSDDEYECEFENQQASSTVVNVDEWKWKLSLLLRSEKDQEIVSRDRKDRRDYEQISSLAKRMGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVESLLQEHLDRLQLNSGKIIGDSDDVKSMNQTNDVDMDENADSFVDEAVMEKVLQRRSLRMRNMQRTWQESPEGKKMLEFRKSLPAFREKEGLLQAIARNQVIVISGETGCGKTTQLPQYVLESQIESGRGAFCNIICTQPRRISAMAVAERVSTERGEPLGETVGYKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGGAPTFNIPGFTYPVRAHFLEDVLEITGYKLSPFNQIDDYGQDKMWKTQRQIAPRKRKNQITSLVEEALSKSSFENYSSKARDSLASWAPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLTCHGSMATSEQKLIFEKPPPNVRKVILATNMAEASITINDVVFVIDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLEVESIGEFLSAALQAPEPRTVQNAIDFLKMIGALDEKENLTNLGKFLSILPVDPKLGKMLIMGAIFRCFDPVLTVVAGLSVRDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIRSLRKQFSFILKDSGLIDEDASINNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVLLYANSVNARYQIIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALKSGIQAGYLKMLEGYIDLFMDPSLADCYLKLKEELDKLIQKKLADPIIDIHKEGKYLMHAVQELVSGDQSEGRFVFGRESRKPRASSDESNFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNHRFQDNGSQPDVTDNMLKLLGKRRRSKGRKG 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01360 1152 CDD SF2_C_RHA 508 661 - -
Bach9g01360 1152 FunFam DExH-box ATP-dependent RNA helicase DExH3 207 432 - -
Bach9g01360 1152 SMART ha2_5 715 806 IPR007502 GO:0004386
Bach9g01360 1152 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 872 953 IPR011709 -
Bach9g01360 1152 SMART DRBM_3 1053 1116 IPR014720 -
Bach9g01360 1152 Gene3D - 516 672 IPR027417 -
Bach9g01360 1152 Gene3D - 202 432 IPR027417 -
Bach9g01360 1152 Gene3D - 695 796 - -
Bach9g01360 1152 PANTHER ATP-DEPENDENT RNA HELICASE 204 955 - -
Bach9g01360 1152 SUPERFAMILY dsRNA-binding domain-like 1044 1119 - -
Bach9g01360 1152 MobiDBLite consensus disorder prediction 1121 1152 - -
Bach9g01360 1152 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 519 693 IPR001650 -
Bach9g01360 1152 Pfam DEAD/DEAH box helicase 265 415 IPR011545 GO:0003676|GO:0005524
Bach9g01360 1152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 262 830 IPR027417 -
Bach9g01360 1152 Gene3D - 1033 1120 - -
Bach9g01360 1152 SMART helicmild6 547 653 IPR001650 -
Bach9g01360 1152 FunFam DEA(D/H)-box RNA helicase family protein 1034 1120 - -
Bach9g01360 1152 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 264 431 IPR014001 -
Bach9g01360 1152 CDD DEXHc_RHA-like 270 430 - -
Bach9g01360 1152 Pfam Double-stranded RNA binding motif 1053 1115 IPR014720 -
Bach9g01360 1152 Pfam Helicase associated domain (HA2) 716 789 IPR007502 GO:0004386
Bach9g01360 1152 MobiDBLite consensus disorder prediction 1031 1053 - -
Bach9g01360 1152 FunFam Putative ATP-dependent RNA helicase DHX36 695 800 - -
Bach9g01360 1152 SMART ultradead3 252 445 IPR014001 -
Bach9g01360 1152 FunFam DExH-box ATP-dependent RNA helicase DExH3 515 671 - -
Bach9g01360 1152 Pfam Helicase conserved C-terminal domain 522 652 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01360 Bach-Chr9 11558938 11568925 Dispersed/Transposed