Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01359 ATGGCTACTACTGCACCCATCCACCTTCCCCCTCCAACCCTCTCTTCTCATTCTCGCTCCGCTAAACATCACTATATTCTCTCTCCCTTCTCAGAAGCGCATACGCACTATCCCAAATTTAACGGCCACAGTTTTTCAACCGTTCTTTCCCGCCAAAATTCCTGCTTTCTTAGGCGCTGTGCTTTGAGAAATCGGAGTTCTTTATCAAGCTTGGTTACAATGGCCTCTGTCAACCCAGAGCCCATGGTTCCTCCTTACAACGTGTTGATAACTGGGTCAACCAAAGGAATTGGATATTCATTGGCAAAAGAATTTCTAAAAGCTGGCGACAATGTCCTAATTTGCTCAAGATCAAATGAAAGGGTGGAATCTGCTGTCCAGACTCTTAGAAAAGAATTTGGGGAGCAGCATGTGTGGGGCACCAAATGTGATGTAAGAGAAGGAGAGGATGTCAAGAATTTAGTCGCATTTGCTCAAGAAAAACTAAAATACATCGATATATGGATTAATAATGCAGGATCAAACGCATATAGCTATAAGCCACTTGCAGAGGCTTCTGATGAAGATCTTATTGAGGTGGTTACAACAAATACGCTTGGTTTGATGATATGTTGCCGAGAGGCAATAAAGATGACGGCAAACCAGCCACGCGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCTGATGGAAGACCAACTCCTAGGTTTGCTGCATATGGAGCAACAAAGCGGAGTGTGGTGCATTTAACCAAATCATTACAGGCAGAGTTGCAGATGCAAGATGTTAAAAACGTTTTGGTGCATAATCTTTCGCCAGGGATGGTCACAACTGATCTTCTCATGTCCGGTGCTACTACAAAGCAGGCTAAGTTCTTCATTAATATCTTGGCTGAACCAGCCGAAGTTGTTGCAGAATCCTTAGTTCCAAACATTAGATCTATCCCTGGCAATGGATCAAGGAAGCCAACTTATATTCGATTCCTCACAGGGTTGAAAGCCTATTCCCAGATATTTTCAAGATTAGCATTTGGGGCAAGAAGGAATCGATACGTTATTGAAGATTGA 1068 0.4298 MATTAPIHLPPPTLSSHSRSAKHHYILSPFSEAHTHYPKFNGHSFSTVLSRQNSCFLRRCALRNRSSLSSLVTMASVNPEPMVPPYNVLITGSTKGIGYSLAKEFLKAGDNVLICSRSNERVESAVQTLRKEFGEQHVWGTKCDVREGEDVKNLVAFAQEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKMTANQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVLVHNLSPGMVTTDLLMSGATTKQAKFFINILAEPAEVVAESLVPNIRSIPGNGSRKPTYIRFLTGLKAYSQIFSRLAFGARRNRYVIED 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01359 355 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 72 353 - -
Bach9g01359 355 FunFam Chlorophyll(Ide) b reductase NOL, chloroplastic 83 328 - -
Bach9g01359 355 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 219 227 IPR002347 -
Bach9g01359 355 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 240 259 IPR002347 -
Bach9g01359 355 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 174 IPR002347 -
Bach9g01359 355 Pfam short chain dehydrogenase 88 283 IPR002347 -
Bach9g01359 355 CDD SDR_c 88 309 - -
Bach9g01359 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 87 304 IPR036291 -
Bach9g01359 355 PRINTS Glucose/ribitol dehydrogenase family signature 87 104 IPR002347 -
Bach9g01359 355 PRINTS Glucose/ribitol dehydrogenase family signature 240 259 IPR002347 -
Bach9g01359 355 PRINTS Glucose/ribitol dehydrogenase family signature 163 174 IPR002347 -
Bach9g01359 355 PRINTS Glucose/ribitol dehydrogenase family signature 264 281 IPR002347 -
Bach9g01359 355 PRINTS Glucose/ribitol dehydrogenase family signature 213 229 IPR002347 -
Bach9g01359 355 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 227 255 IPR020904 GO:0016491
Bach9g01359 355 Gene3D - 86 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01359 Bach-Chr9 11553471 11557387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01359 57 280 Acyl Lipid Metabolism Gene Families AT1G24360 28.270 9.16e-15 72.4