Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01288 ATGGAAGAGGGAAAGCCCTCGGTGAGCTCAGCCAACAGTTCACAGGCTGATGGGGAACATGGGGACCCTACTGATTCTCGATTCGCTGAGCTATGCAAGAATGGACTATTATTGGATGAGAAAAGTTTTAGACGAGCAAGGAAACTGTTCACAGAAACCAAATCTGTTCTACTGGCGAATATCTCATCTATTGGGAATGGGACGTCTGAAGAAGCAGAACGGTATTGGTTTTCATTTGTTCTATACACAGTCGAGGGTTTGACTGAGAATAGTGCAGACAGTGGAAAGGAAGAGACTGATAGCAACAGGCTTACCTTTTGCCAAATATTGAGAGTAGCAAAGCTTAACATCTCAGATTTTTTTAAAGAGCTTCATCAGTTTATTGATAAGGCTGGCGCAATTTTAAGTAATCTATATGGCACCGATTGGGAAAACAGGCTCAAGGTATCGATAAGTAGAGAATCATGCTTATGTTTTTGCAATGTTTCTGTTCAAGTGTACGTGAAGGAGTTGCAAGCTAATATTTCTCTCTTGAGAATTCTTAGCAATAAATATAAACGTGCATTTGGGGATTTCTTCTTGACAAATAATGCAAATATTGAGGAGCAGTCAGCTGTTCCCAGGGCCACTAATTATGCATCTGAATACTATCGTTTTGGATGGCTACTCTTCTTGGCACTTCGTGTACATGCTTTTAGCCGTTTTAAAGACTTGGTGACCTTCACCACTGGTTTAGTTTCTATATTGGCCATCTTAATCATTCATGTTCCTGTTCGTTTTCGGAATTTTAACATTAACGACTCTTCACTGTTTGTCAAAAGAAGTACCAAAGCTGTGGACCTCGTTGGGTCTCTTTGCCAAATTTATCAAACTCCAGAAGATGAGTTGAGGAAAACAATAGAGAAGGCCAATAAATTAATTGCAGATATATTGAACAAGAAGCCTTGTTTGGCATGTGAATGTGAAGCTGCAAACCTCGAGAATATTGATAGAGATGGTTTGATTTGTTTTAGAGATCTAATGGAGGAAACATCTCTAAAATCTGATTTGGATATCTTAGAAAAAGATTATGATAATGCACTTCATGACAAGGGTGAACTGGATGAGAGATTGTTCATTAATGAGGATGATAGCTTATTAGTTTCAGGAAGCTCGTCCAGTGGTTCTATTTCTATGAATGGTGTCAAGAGGAAATTTGATTCACTGGCATCCCCTACAAAGACAATTACAAGTCCACTGTCTCCCCACTGTTCTCCAGCTTCTCATGCAAATTCAAAGATGGCAGCCACCCCTATTAGCACTGCAATGACTACTGCCAAGTGGCTTCGTACTGTTGTATCTCCACTTCCATCAAAGCCCTCACAGGAGCTGGAGAGATTCCTCACATCATGTGATAGGGATGTTACTGGTGATGTGGTGCACAGGGCACAGATTATATTGCAGGCTATATTTCCTAGTAGTCCTCTGGGAAAACGGTGTGTAACTGTAAGCATGCAAAACGCAAACCTCATGGACAACGTCTGGGCAGATCAACGAAGACTGGAAGCCCTGAAGTTATACTACAGGGTCTTGGAAGCAATGTGTAGAGCAGAAGCCCAAAAGCATGCAACTAATTTGACCTCTCTATTAACTAATGAGAGGTTCCATAGATGTATGCTTGCATGTTCTGCAGAATTGGTCCTGGCAACGCATAAAACTGTAACAATGCTGTTTCCTGCAGTGCTGGAGAGGACTGGAATCACAGCTTTTGATCTTAGCAAGGTGATAGAAAGTTTCATAAGACATGAGGATTCTCTCCCAAGAGAATTAAGGCGACATCTGAATTCATTGGAAGAACGACTTTTGGAAAGCATGGTATGGGAAAAGGGTTCTTCGTTGTATAATTCTTTGATAGTTGCTAGACCTACCCTCTCGGCAGAAATAAATCATCTAGGATTATTAGCTGAACCGATGCCATCACTGGATGCAATTGCAATGCATATTAACTTCTCCTGTGGTGGGTTGCCCCCTCTGCCTTCCTTGAAGAAGCTTGAAAATTCACCAAGTCAGAATGGGGATACTAGGTCTCCAAAGCGGCTCTGCATGGAGAATCGAAATGTGCTGGCAGAACGGAATTCCTTTACCTCACCAGTGAAGGATCGGCTTCTGCCCTTCAGTCATGTTAAGTCAAAGCTACCCCCTCCTCCTTTGCAGTCAGCATTTGCAAGTCCAACAAGACCCAATCCAGGAGGTGGAGGGGAAACTTGTGCTGAAACTGGGATCAATATCTTTTTTGGAAAGATCATTAAGTTGGCAGCAGTCAGAGTAAGTGGCATGGTTGAAAGGCTGCAATTGTCTCAGCAGATAAGGGAGAATGTATACTATCTTTTCCAACAAATCTTAAGTCAACGGACATCTCTCTTCTTTAACCGTCATATTGACCAAATCATCCTCTGTTGTTTCTATGGAGTTGCAAAGATTTCTCAACTGAGGTTAACTTTTAGGGAGATCATTAATAACTATAGGAAGCAACCACAATGTAAACCTCAAGTTTTCCGTAGTGTATTTGTTGATTGGTCATTGGCACAGCGTAATGGGAAAACAGGACAGGAGCATATTGATATCATCGCATTTTACAATGAAATATTCATTCCCTCTGTTAAGCCTCTGCTGGTTGAGCTTGGCCCTGGGGGGACAACAATGAGAAGTAACCAGATACCTGAAGTTAACAATAAAAATGATGGGCATGCAGTTCAGTGTCCTGGATCTCCTAAGATATCTCCTTTTCCAAGCCTTCCTGATATGTCTCCAAAAAAGGTTTCTGCGGTACACAATGTGTATGTCTCTCCATTGCGGTCATCTAAGATGGATGCTCTAATATTACATAGCTCGAAAAGCTACTATGCCTGCGTTGGGGAGAGCACTCATGCATATCAGAGCCCTTCGAAAGACCTGACTGCCATCAATGACCGTTTGAATAGCAACAGAAAGGTCAGAGGATCCCTCAACTTTGATGATGTTGATGTTGGCTTGGTTAGTGATTCTGTGGTGGCCAACAGTCTTTATCTTCAGAATGGCAGTTGTGCATCGGCATCTGGTGCGCCATTGAAGTCTGAGCAACCTGACTCTTGA 3111 0.4204 MEEGKPSVSSANSSQADGEHGDPTDSRFAELCKNGLLLDEKSFRRARKLFTETKSVLLANISSIGNGTSEEAERYWFSFVLYTVEGLTENSADSGKEETDSNRLTFCQILRVAKLNISDFFKELHQFIDKAGAILSNLYGTDWENRLKVSISRESCLCFCNVSVQVYVKELQANISLLRILSNKYKRAFGDFFLTNNANIEEQSAVPRATNYASEYYRFGWLLFLALRVHAFSRFKDLVTFTTGLVSILAILIIHVPVRFRNFNINDSSLFVKRSTKAVDLVGSLCQIYQTPEDELRKTIEKANKLIADILNKKPCLACECEAANLENIDRDGLICFRDLMEETSLKSDLDILEKDYDNALHDKGELDERLFINEDDSLLVSGSSSSGSISMNGVKRKFDSLASPTKTITSPLSPHCSPASHANSKMAATPISTAMTTAKWLRTVVSPLPSKPSQELERFLTSCDRDVTGDVVHRAQIILQAIFPSSPLGKRCVTVSMQNANLMDNVWADQRRLEALKLYYRVLEAMCRAEAQKHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWEKGSSLYNSLIVARPTLSAEINHLGLLAEPMPSLDAIAMHINFSCGGLPPLPSLKKLENSPSQNGDTRSPKRLCMENRNVLAERNSFTSPVKDRLLPFSHVKSKLPPPPLQSAFASPTRPNPGGGGETCAETGINIFFGKIIKLAAVRVSGMVERLQLSQQIRENVYYLFQQILSQRTSLFFNRHIDQIILCCFYGVAKISQLRLTFREIINNYRKQPQCKPQVFRSVFVDWSLAQRNGKTGQEHIDIIAFYNEIFIPSVKPLLVELGPGGTTMRSNQIPEVNNKNDGHAVQCPGSPKISPFPSLPDMSPKKVSAVHNVYVSPLRSSKMDALILHSSKSYYACVGESTHAYQSPSKDLTAINDRLNSNRKVRGSLNFDDVDVGLVSDSVVANSLYLQNGSCASASGAPLKSEQPDS 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01288 1036 FunFam Retinoblastoma-related protein 1 704 917 - -
Bach9g01288 1036 Pfam Retinoblastoma-associated protein B domain 754 881 IPR002719 GO:0005634|GO:0051726
Bach9g01288 1036 Gene3D - 433 620 - -
Bach9g01288 1036 Gene3D - 707 905 - -
Bach9g01288 1036 SMART DUF3452_2 87 255 IPR024599 -
Bach9g01288 1036 Coils Coil 350 370 - -
Bach9g01288 1036 SUPERFAMILY Cyclin-like 438 632 IPR036915 -
Bach9g01288 1036 MobiDBLite consensus disorder prediction 1 19 - -
Bach9g01288 1036 Pfam Domain of unknown function (DUF3452) 98 255 IPR024599 -
Bach9g01288 1036 FunFam Retinoblastoma-related protein 1 216 374 - -
Bach9g01288 1036 Gene3D - 216 374 - -
Bach9g01288 1036 Coils Coil 293 313 - -
Bach9g01288 1036 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 23 1034 IPR028309 GO:0006357|GO:0051726
Bach9g01288 1036 SUPERFAMILY Cyclin-like 752 924 IPR036915 -
Bach9g01288 1036 FunFam Retinoblastoma-related protein 1 433 620 - -
Bach9g01288 1036 MobiDBLite consensus disorder prediction 1 25 - -
Bach9g01288 1036 SMART RB_A_2 430 630 IPR002720 GO:0005634|GO:0051726
Bach9g01288 1036 Pfam Retinoblastoma-associated protein A domain 430 630 IPR002720 GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01288 Bach-Chr9 10268224 10275966 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Bach9g01288 RB_A 5.6e-64 CL0065