Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01245 ATGTCTGTAGACTCTATACCGAATGATGATTCTGATATCAAGGATGCTGCAGTTGCAGGGTCATCTTGCCTTTATGATCTCTTGTGTTCTGAAACGCCAAGTTTGGAGTCCCAACGAGACAAATGGATGGCTTCTGGTCCACAAAAAAGGCTGGAGAATCTAATGTGTCAAGCTGGGAATAAGTTCTGTGCTGATTGTGGAGCACCAGAGCCAAAATGGGTGTCTTCTAGTCTTGGAGTATTTATTTGCATCAAGTGTTCAGGAGTACATAGAAGCATGGGAGTCCATATATCAAAGGTTCTATCAGTGAAGCTAGATGAGTGGACAGAAGAACAAGTTGATGACTTGGTGAAATTGGGCGGAAATACAGTAGCAAATATGAAGTATGAAGCTTGTGTCCCAAGTAATATAAAGAAACCAAAACCAACTTCCTCCAACGAGGAACGGTCTGATTTTATTAGGAGAAAATATGAGCACCTACAGTTTTTGCATTCTGATGAAAACTTGTCCTTGGCCTGTCCCTTTCCACCAACTCATGGAAGACATTCTTCGATAGACAAGAAACATTATGATAAACAACCAACCAAACATCGAATAGGGCATGCGTTTCGTAACAGCTGGGGAAGAAGAGATTCTGACCATAAGTCTACAAAGAAGAGCCACTCCTTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTAGTCAAAGGCACCAACTTGGCTGTCCGGGATGTAAGGACTAGTGATCCGTATGTTCTCCTTGCCTTGGGTCAGCAATCAGTAAAGACACGGGTCATAAAGAACAACTTGAATCCAGTCTGGAATGAAAGCTTAATGCTGTCAATTCCAGAGAACATTCCTCCCCTGAAAGTGATTGTGTACGACAAAGATACATTTACAACTGATGATTTCATGGGTGAAGCTGAAATAGACATTCATCCTTTGCTTCAAGCAGCAAAGGCGTATGAGAAATCCACAATCAACGAGTCCATGCAGCTTGGATCTTGGGTTGCAACCAACGATAACACCCTCGTTAGAGACGGTATCATCTCCTTGGAAGAAGGGAGGATCAAACAAGTAATCTCACTGAGGCTACAGAATGTTGAAAGAGGTTATCTGGAGATTGAGCTTGAGTGTCTTCCTCTTACTCAATAG 1164 0.4227 MSVDSIPNDDSDIKDAAVAGSSCLYDLLCSETPSLESQRDKWMASGPQKRLENLMCQAGNKFCADCGAPEPKWVSSSLGVFICIKCSGVHRSMGVHISKVLSVKLDEWTEEQVDDLVKLGGNTVANMKYEACVPSNIKKPKPTSSNEERSDFIRRKYEHLQFLHSDENLSLACPFPPTHGRHSSIDKKHYDKQPTKHRIGHAFRNSWGRRDSDHKSTKKSHSLAGMVEFVGLIKVNVVKGTNLAVRDVRTSDPYVLLALGQQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVIVYDKDTFTTDDFMGEAEIDIHPLLQAAKAYEKSTINESMQLGSWVATNDNTLVRDGIISLEEGRIKQVISLRLQNVERGYLEIELECLPLTQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01245 387 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 44 387 IPR044518 GO:0005096|GO:0005543
Bach9g01245 387 CDD C2_ArfGAP 230 374 - -
Bach9g01245 387 ProSiteProfiles C2 domain profile. 209 329 IPR000008 -
Bach9g01245 387 Gene3D Arf GTPase activating protein 31 170 IPR038508 -
Bach9g01245 387 SMART C2_3c 232 327 IPR000008 -
Bach9g01245 387 FunFam stromal membrane-associated protein 1 isoform X1 34 168 - -
Bach9g01245 387 SMART arf_gap_3 48 170 IPR001164 GO:0005096
Bach9g01245 387 SUPERFAMILY ArfGap/RecO-like zinc finger 48 164 IPR037278 -
Bach9g01245 387 Gene3D C2 domain 230 387 IPR035892 -
Bach9g01245 387 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 228 323 IPR035892 -
Bach9g01245 387 Pfam Putative GTPase activating protein for Arf 49 164 IPR001164 GO:0005096
Bach9g01245 387 Pfam C2 domain 232 322 IPR000008 -
Bach9g01245 387 PRINTS HIV Rev interacting protein signature 60 79 IPR001164 GO:0005096
Bach9g01245 387 PRINTS HIV Rev interacting protein signature 100 121 IPR001164 GO:0005096
Bach9g01245 387 PRINTS HIV Rev interacting protein signature 79 96 IPR001164 GO:0005096
Bach9g01245 387 ProSiteProfiles ARF GTPase-activating proteins domain profile. 48 170 IPR001164 GO:0005096
Bach9g01245 387 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 229 387 - -
Bach9g01245 387 CDD ArfGap 51 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01245 Bach-Chr9 9917262 9922557 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00399 13 9118084 9124435 Bach9g01245 9 9917262 9922557 BWGD