Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01055 CAAAGTTTCAATCTTTAGACAGCTTAGATGTTTGTTTCTTATAGAATATGATGGTATCATGGTTGAACCTGGATTGGCTTCTTCGTTTGGCAGAAAAAGGATTGAATATTTCAGAAAATAAACTTGCTGGGTCTTGGTCCCTGTGTTTCATTTTGTTGGCGATACTTGGGTTGCTTCACTTGGCAGAAAAAAACAGAGCACCCAGTTCCAATGACAATGAGGATGAGCAGAGCGAGCTGAAAACAGAGGAGGAGGAGCCAAGTGGCCAAGAAATACACCCAAATAGTTTTGATTATTGTATGGATGGTAAGTTTTCCGGTGACCGGACCGCCACGCCTGGCGGCGAATGCGCCTTCTGTGGCAATTTAAGCAGCACAAGATGCTCTCGCTGCAAGGCTGCTAAATATTGCTCGGTGGAATGCCAAATTAGACACTGGAGAGCAGGGCACAAGTATGACTGCGTTGAGACAGAGACGGTGGAGCCTCAAGCAAGTCCTGTTCATGGAGCCTCTATGCTTGAGAAAAATAAAAGGACAAACTATCATGGTTCCAACAGTGTAATTGAATCGAATGCAAGTGTGGGAGAGGTGGAGTTTAGGCAGCGCAGTGATGACTGCAGTGCAATCGTTAGCAGTTGCAATGCCAATAGCTGCGCCGTATGTGGAGGTCCAACCACTACCAGCTGCTCAAGATGCAAAGCAGTCAGATACTGCTCACCAAAATGCTTAATTGAGGATTGGACATGGCATAAAGTTCACTGTTCTGCTGGGGAAGTGAATCCCACCAAAGCTGAAAGTCCTTCTCATGAAAGCATTAGAATGTCCCAAAACTTATGTGAAGAAGAAGACGCTCAATCATATGGTCAACTTTCATTGGAATATTTTCCAGAGGGAACCACCATCACCAAATCTCTGGTTGCTATCTCTCAGGAACCTGCTACAAAAGAGCACGACCATACTGCAGAATGGGTATGTTATGAGCAAGAACTCGAAAAATCAAGGAATGAGATTATACTCCTAAGATTAGAGCGTGACAAGTGGGCGGGGCGAGCAAATTTTGCCAGAGAGAAATACCGCAGTTTGAAGAAGGAATTTGAACAACAGCTTTTTGTGTTGAAGCATGAAAAAGAGTTGATATTGAACGCTGAGAGGCAGGCTCGCAGTGTGAATCAAAGTTTATCTGAGAGGCTATACCGTTTGCAGATAGCTATACAAGCAAGCGTTACAGAGAAGAGAAAACATGAAGAGTATATACAAATTCTAGAGAGTGAATTGGCTCAGACAAAGAAAGACCAGCAACAAGAGCGGTTACATTCACAATGGCTTACAGTGGCCCATGACAAGAGTCTTGAAACTGCACAAGTTTCCATGACACAAGTTGAAGATCTACAACGACAGTTGCAAGTAGAGCGTGGAGATGTCCAAAAGCTTACAGAGAATTTACTTGGAAAAGTTAAAGCTGCTCAATCTAGAGCTGCTGTTGCTGAGCAAAGACTCCGTGATCTTGAGAGAAAAATCAAATCAACAAATGATAGGGTTCCTGTCTGGACGGACAGTACAGGCAGACCCGCTATGGCATGCGCTATTTGCTTGACCTATGAAAAGGACTTGGCCTTTGGATGTGGCCACATGACTTGTAGAGATTGCGGATCAAAAGTTTCCAAGTGTCCTATATGCAGGGAGCAGATCACTAGCAGTGTCAGGCTGTTTCCTGGCTCACAGGTATGCCAAAGTATCCACTGGAGATTATGGCATGAATATGAATGCCTTGAAATAGAGACGAGGGTAAATCAAGGAAGAGTTGCTGATGCTGAGGAAACCTGGGAGCTCGTCGACGATCCTGTCAACGGAAGCAGTTCTTGCGGTACATGCGATGAAGATGAAGAGGATTCAGATATTGAAGAAAGAGGAGAGGAGCCCACTCATGAGTCCATTGATCCAACTAGAATGCTTGGGGCTGTTAACGATCACAATGGCTGTGCAGTTTGTGGCAATCCAATCACAAAAAGCTCAACAAAATGCCAAAATCACTGGAAATTTGGCCATGAACTTCAAGGCGTTGTTGAGGAAGTTAATTCGGATAGAACATTGATTGCTCGTCAAGGAAGATCAGCTCATCCAAACGCTAGAATGTTACATACTAGATATGAAGAGGAAAACAATACTCATTCCTCTGTTCCCCTTGCAATTTTGGGATCTTCTTCCAAGTCTCTTATCATTAGAAATTCTCAGGAAACTACTGAGGAAGTTCAAGAGGAGTTTGCACAATGGGTGAGATGCCTTGAGGAAGAACTGGCAAAGTCTAGGAATGAGAGTATGTTACTGAAATCAGAGCGTGGAAAGTGGGACATTAGAACCAAGTTTGTTGCAGATAGTCTTCACCGCTACATGACAGAATCTCAAAACAAGTTGTTGATTTTGGAGCGAGAAAAGGAACTGATTTCAAATGCTGAGAAGCAAGCTCGTGATATGGTTCATAGTTTATCGGGGAGGCTCCACTGCTTGCAGATTGCAGAGGAAGCAAGAGTTGCAGAGAAGAGACAGCAAGAAGAATATATACAGACGCTGCAGCGTGTTAATTTACAGACTGAATGTGCCAAGGCCAAGAGACAGCTGGAAGAAGAGAGCAAATGTGTCCGCACGCTTACAATGGAGCGTGAAGAGGCTAATCAAAGGTTCATCAATGCCCTTAATGCTGCAGCAACTGCTGATTCCAGAGCTGCCGCTGCTGAGGCAGTTCAAACAGAAGGTTTGAGCAGACAGAACACCTTCTCTAATAAACAAGTTTGTGCAATCTGCCTGACCAATGAAAAGGACATGGCATTTGGATGCGGGCACATGACTTGCAGAGATTGTGGGTCAAAGATATCAAAGTGTCCAATTTGTCGGAAAAAGATCACCAGCCGTGTTAAGCTGTTTATTGGGTGA 2927 0.4414 MMVSWLNLDWLLRLAEKGLNISENKLAGSWSLCFILLAILGLLHLAEKNRAPSSNDNEDEQSELKTEEEEPSGQEIHPNSFDYCMDGKFSGDRTATPGGECAFCGNLSSTRCSRCKAAKYCSVECQIRHWRAGHKYDCVETETVEPQASPVHGASMLEKNKRTNYHGSNSVIESNASVGEVEFRQRSDDCSAIVSSCNANSCAVCGGPTTTSCSRCKAVRYCSPKCLIEDWTWHKVHCSAGEVNPTKAESPSHESIRMSQNLCEEEDAQSYGQLSLEYFPEGTTITKSLVAISQEPATKEHDHTAEWVCYEQELEKSRNEIILLRLERDKWAGRANFAREKYRSLKKEFEQQLFVLKHEKELILNAERQARSVNQSLSERLYRLQIAIQASVTEKRKHEEYIQILESELAQTKKDQQQERLHSQWLTVAHDKSLETAQVSMTQVEDLQRQLQVERGDVQKLTENLLGKVKAAQSRAAVAEQRLRDLERKIKSTNDRVPVWTDSTGRPAMACAICLTYEKDLAFGCGHMTCRDCGSKVSKCPICREQITSSVRLFPGSQVCQSIHWRLWHEYECLEIETRVNQGRVADAEETWELVDDPVNGSSSCGTCDEDEEDSDIEERGEEPTHESIDPTRMLGAVNDHNGCAVCGNPITKSSTKCQNHWKFGHELQGVVEEVNSDRTLIARQGRSAHPNARMLHTRYEEENNTHSSVPLAILGSSSKSLIIRNSQETTEEVQEEFAQWVRCLEEELAKSRNESMLLKSERGKWDIRTKFVADSLHRYMTESQNKLLILEREKELISNAEKQARDMVHSLSGRLHCLQIAEEARVAEKRQQEEYIQTLQRVNLQTECAKAKRQLEEESKCVRTLTMEREEANQRFINALNAAATADSRAAAAEAVQTEGLSRQNTFSNKQVCAICLTNEKDMAFGCGHMTCRDCGSKISKCPICRKKITSRVKLFIG 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01055 959 Pfam Zinc finger, C3HC4 type (RING finger) 911 952 - -
Bach9g01055 959 Pfam Zinc finger, C3HC4 type (RING finger) 510 549 - -
Bach9g01055 959 Gene3D - 90 143 - -
Bach9g01055 959 ProSiteProfiles Zinc finger MYND-type profile. 202 238 IPR002893 -
Bach9g01055 959 Pfam MYND finger 101 138 IPR002893 -
Bach9g01055 959 Pfam MYND finger 202 238 IPR002893 -
Bach9g01055 959 Coils Coil 395 415 - -
Bach9g01055 959 SUPERFAMILY HIT/MYND zinc finger-like 100 140 - -
Bach9g01055 959 SUPERFAMILY HIT/MYND zinc finger-like 197 240 - -
Bach9g01055 959 SUPERFAMILY RING/U-box 510 554 - -
Bach9g01055 959 Coils Coil 469 496 - -
Bach9g01055 959 SUPERFAMILY RING/U-box 907 953 - -
Bach9g01055 959 ProSitePatterns Zinc finger MYND-type signature. 101 138 IPR002893 -
Bach9g01055 959 ProSiteProfiles Zinc finger MYND-type profile. 101 138 IPR002893 -
Bach9g01055 959 ProSiteProfiles Zinc finger RING-type profile. 914 947 IPR001841 -
Bach9g01055 959 Coils Coil 842 876 - -
Bach9g01055 959 MobiDBLite consensus disorder prediction 600 630 - -
Bach9g01055 959 ProSiteProfiles Zinc finger RING-type profile. 511 544 IPR001841 -
Bach9g01055 959 Gene3D - 191 242 - -
Bach9g01055 959 MobiDBLite consensus disorder prediction 50 78 - -
Bach9g01055 959 Coils Coil 791 811 - -
Bach9g01055 959 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 502 555 IPR013083 -
Bach9g01055 959 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 899 958 IPR013083 -
Bach9g01055 959 Coils Coil 444 464 - -
Bach9g01055 959 PANTHER CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING 786 957 - -
Bach9g01055 959 Coils Coil 742 762 - -
Bach9g01055 959 SMART ring_2 914 946 IPR001841 -
Bach9g01055 959 SMART ring_2 511 543 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01055 Bach-Chr9 7933968 7943210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01055 87 148 Miscellaneous Gene Families AT4G31670 42.188 3.94e-10 61.6