Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00795 ATGGATCCTTCCAAGAAGCGTAAAATTGATGAAAATGGCGTTGTCTCTGTCGATTCCGATCTCACGCTTTCCCCTGATGACGCGCGTAAAATTATCGAGCGCTTCAACCCCGAACAACTCATCGATATCCTCCAGGACGCCGTCGTTCGCCATGCCGACGTCCTCGACGCCGTCCGGTTAATTGCAGATCCTGATGTCGCTCAGCGTAAGTTGTTTATTCGTGGCCTTGGGTGGGACACCACCACCGACGGCCTACGCTCCCTTTTCTCAACCTACGGTGAGCTTGAAGAAGCTGTCGTGATTACCGATAAGGCCACTGGTAAATCCAGGGGCTATGGATTTGTCACTTTTAGGCACGTTGATGGTGCTTTGCTTGCTCTCAAGGAGCCCAGCAAGAGGATAGATGGTCGTGTCACCGTTACGCAGCTTGCGGCGGCTGGAAATTCGGGTTCGAATACGAACCCGGTAGACATTGCGTTGAGAAAAATATACGTGGCAAATGTGCCGTCAGAGCTACCGGCCGACAAATTATTGGCTCACTTTTCACTGTATGGAGAGATTGAAGAAGGGCCATTGGGGTTTGACAAGCAGACGGGTAAGTCAAAGGGGTTTGCTTTGTTTGTTTATAAGACAGCGGAGGGAGCACAAGCAGCACTTGTGGATCCGGTGAAGACTGTTGAGGGAAAGCAGCTGACTTGCAAGTTGGCGATAGATGGGAAGCAAGGGAAACGAGGGGGTGGCCCAATGGGAGATGGAGTGCAGGGTCCTGGAAACTCTCATGGGGATGGAATGGGTATGCCTCCCCCGGCTTCTATGCCAGGCTCGTATGCTGGGTCCGTTGGCCTAGGTTCCTATGGTGGGTTTACAGGTGGACTTCAGGGTCAGCCACCTCTGGGTAATCATACGTTGAATTCATCGTTGGGTGGTCCGGGATTGTCCTCGGTTGGTAATCAGGCTCCCTCTTCGCTAGGTGGTACTGGGGCGTATGGTGGGCTTGGTGGTCCTTATGGCGGTTATGGTGGGACTGCGTCATCTGGTTTTGGTGGATTGGGCGGTAGTGGTGCCACAGGCTTGGGGGGAGGTAGTGGTGCATTGGGTGGCGCTGGTTTGTATAGATTACCGACTTCAGCTGGAATGCCTGCTGGTGGCTATCAAGAGAGTGGACATTTCGGTTTATCATCGTCTGGGTACCCGAATCAGCATCACCCGCCGACTGGAGCGTCACCTGTTCCTAGAGTTCCACCTGGTGGAATGTATCCAAATGTGCCCCCTTACTACTGA 1281 0.5316 MDPSKKRKIDENGVVSVDSDLTLSPDDARKIIERFNPEQLIDILQDAVVRHADVLDAVRLIADPDVAQRKLFIRGLGWDTTTDGLRSLFSTYGELEEAVVITDKATGKSRGYGFVTFRHVDGALLALKEPSKRIDGRVTVTQLAAAGNSGSNTNPVDIALRKIYVANVPSELPADKLLAHFSLYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALVDPVKTVEGKQLTCKLAIDGKQGKRGGGPMGDGVQGPGNSHGDGMGMPPPASMPGSYAGSVGLGSYGGFTGGLQGQPPLGNHTLNSSLGGPGLSSVGNQAPSSLGGTGAYGGLGGPYGGYGGTASSGFGGLGGSGATGLGGGSGALGGAGLYRLPTSAGMPAGGYQESGHFGLSSSGYPNQHHPPTGASPVPRVPPGGMYPNVPPYY 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00795 426 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 146 IPR000504 GO:0003723
Bach9g00795 426 MobiDBLite consensus disorder prediction 295 319 - -
Bach9g00795 426 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 163 220 IPR000504 GO:0003723
Bach9g00795 426 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 138 IPR000504 GO:0003723
Bach9g00795 426 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 161 238 IPR000504 GO:0003723
Bach9g00795 426 SMART rrm1_1 162 234 IPR000504 GO:0003723
Bach9g00795 426 SMART rrm1_1 70 142 IPR000504 GO:0003723
Bach9g00795 426 MobiDBLite consensus disorder prediction 404 426 - -
Bach9g00795 426 Gene3D - 59 154 IPR012677 -
Bach9g00795 426 SUPERFAMILY RNA-binding domain, RBD 152 263 IPR035979 GO:0003676
Bach9g00795 426 Gene3D - 155 266 IPR012677 -
Bach9g00795 426 MobiDBLite consensus disorder prediction 388 402 - -
Bach9g00795 426 SUPERFAMILY RNA-binding domain, RBD 63 144 IPR035979 GO:0003676
Bach9g00795 426 MobiDBLite consensus disorder prediction 382 426 - -
Bach9g00795 426 MobiDBLite consensus disorder prediction 291 319 - -
Bach9g00795 426 MobiDBLite consensus disorder prediction 239 265 - -
Bach9g00795 426 PANTHER GEO13361P1-RELATED 53 330 - -
Bach9g00795 426 FunFam UBP1-associated protein 2C isoform A 52 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00795 Bach-Chr9 5598756 5600036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00795 157 244 C2H2 Transcription Factor Family AT2G19380 38.889 1.87e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00795 9 5598756 5600036 Bach9g00795 9 5598756 5600036 ECH