Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02577 ATGGCCTCGCAAACAGCTAGTAATTCAACTACCCCTAGTGCCCAAGTGGTTGGAAATGCATTTGTTGAACAGTATTACCATATTCTTCACCATTCACCAGAATTAGTCTATCGATTTTACCAGGATTCTAGTGTGCTAAGCCGACCTGATTCCAATGGGGTGATGACATCAGTGACAACCATGCAAGGCATTAATGATAAGATTCTTTCAATGAATTTCAAGGACTTTAAAGCAGAGATAAAAACTGCAGATGCTCAGAAGTCTTATGAGGAGGGAGTGACTGTGCTAGTGACTGGATGTTTGACGAGCAAGGATAAATTGAGAAGAAAATTTGCACAGTCATTCTTTCTTGCTCCTCAAGACAATGGATATTTTGTCCTGAATGATGTTTTTAGGTATGTAGAAGATAGTGAACCAATGGATCAGCATCCAGTTAATGGAGTTGACGATGCAGTTGCTGTTATTGTAACCCCAGACCCAGAGCCCACTCATGTTTCTGATCCTTCTGCTCCAGATCCCTCAAATTCTCATTTAGAAGAGGACTTAAATGTTGCCGAGAATGCTTATGAGCCATTTAATCATGAGAGACAATTAGCTAATGAAAATGAGGATGTTTTGGAATCCCATTTGCAGTCAAATGGGAATGATGTTTCTCAGGACACAGAACTGGTTTCTTCTTCGGCCCAAGAGGATGCTCCAAAGAAGTCTTATGCATCAATTGTGAAAGTCCTAAAAGGGAGTTCAGGGTTAACTAAAGTCTATGTACCTACTAATACTGTAAAGGCAGCACCTAAGAAAACTGAGAACAAGTCAGTTGAGAGAGTAGTACCTGCTACAGTGCCTGAAGCAGCACCAAATTCAAATAGTGTTAGTACGCCTGAAAGTAACAATGATAACGAGGAAGTTGAGGGGCACTCCATTTACATTAGAAACCTGCCCTTCAACGTCACGGTTGCTCAGTTGGAAGAAGAATTTAAGAAATATGGAGACATCAAGCCAGGAGGCATTCAAGTCAGAAATAATAAGCAGCAGGGATACTGTTTTGGATTTGTCGAATTCCAGTCTTGGACTTCCATGAATAGTGCACTTCAGGCTTCACCAATTAACATTTGGGGGCGTCCCGCTACAGTTGAGATAAAGAGAACTACTACACGAGTTGGTACTACTAGCCCTGCTGCTGCTCCTCCTGGAAGAGGAAGGTTCCCATCTGGAAGAGGTGGCTTCCGAAATGACAGTTTCCGAGGCCGCAATTACGGTGGTGGTCGGGGCTTTGGTCGAAACGATTATATAAACCGAGGTGACTTCTCCGGTAGGGGTAGGAATCCTGGGGGTCGTGGTGAAGGTTATCAACAAGGGAGGGGGAGAGGTGGCCGTTCAAGCGGACAAAAACCAACTTCTGTTTCTACATAA 1410 0.4333 MASQTASNSTTPSAQVVGNAFVEQYYHILHHSPELVYRFYQDSSVLSRPDSNGVMTSVTTMQGINDKILSMNFKDFKAEIKTADAQKSYEEGVTVLVTGCLTSKDKLRRKFAQSFFLAPQDNGYFVLNDVFRYVEDSEPMDQHPVNGVDDAVAVIVTPDPEPTHVSDPSAPDPSNSHLEEDLNVAENAYEPFNHERQLANENEDVLESHLQSNGNDVSQDTELVSSSAQEDAPKKSYASIVKVLKGSSGLTKVYVPTNTVKAAPKKTENKSVERVVPATVPEAAPNSNSVSTPESNNDNEEVEGHSIYIRNLPFNVTVAQLEEEFKKYGDIKPGGIQVRNNKQQGYCFGFVEFQSWTSMNSALQASPINIWGRPATVEIKRTTTRVGTTSPAAAPPGRGRFPSGRGGFRNDSFRGRNYGGGRGFGRNDYINRGDFSGRGRNPGGRGEGYQQGRGRGGRSSGQKPTSVST 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02577 469 SUPERFAMILY NTF2-like 13 134 IPR032710 -
Bach8g02577 469 MobiDBLite consensus disorder prediction 455 469 - -
Bach8g02577 469 SUPERFAMILY RNA-binding domain, RBD 284 385 IPR035979 GO:0003676
Bach8g02577 469 CDD RRM_SF 307 378 - -
Bach8g02577 469 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 13 452 IPR039539 -
Bach8g02577 469 SMART rrm1_1 306 378 IPR000504 GO:0003723
Bach8g02577 469 ProSiteProfiles Nuclear transport factor 2 domain profile. 17 133 IPR018222 -
Bach8g02577 469 MobiDBLite consensus disorder prediction 281 300 - -
Bach8g02577 469 MobiDBLite consensus disorder prediction 158 178 - -
Bach8g02577 469 MobiDBLite consensus disorder prediction 282 297 - -
Bach8g02577 469 Gene3D - 5 138 - -
Bach8g02577 469 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 305 382 IPR000504 GO:0003723
Bach8g02577 469 MobiDBLite consensus disorder prediction 205 232 - -
Bach8g02577 469 MobiDBLite consensus disorder prediction 383 469 - -
Bach8g02577 469 FunFam Nuclear transport factor 2 family protein 8 137 - -
Bach8g02577 469 CDD NTF2 13 135 IPR018222 -
Bach8g02577 469 Gene3D - 255 386 IPR012677 -
Bach8g02577 469 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 307 365 IPR000504 GO:0003723
Bach8g02577 469 Pfam Nuclear transport factor 2 (NTF2) domain 17 133 IPR002075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02577 Bach-Chr8 32075927 32080070 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g02577 8 32075927 32080070 Bach8g02577 8 32075927 32080070 ECH