Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02529 ATGGGGAGAGGAAGAGTGGAGTTGAAGAGAATAGAGAACAAGATAAACAGGCAGGTCACGTTTGCAAAGAGGAGAAATGGGCTCCTCAAGAAAGCTTATGAGCTTTCTGTTCTCTGTGATGCTGAGGTTGCACTCATCGTTTTCTCAACCCGTGGCAAGCTCTATGAGTTCTGTAGCAGCTCTAGCATGCTCAAAACAATTGAAAGGTACCAAAAATGCAGTTATGGTTCACTGGAAGTCAGCAAACCTGCAAAAGAGCTTGAGAGCAGCTACCGTGAGTACCTGAAGCTGAAAGCAAGATTTGAATCTCTTCAAAGGACCCAGAGGAACCTTCTTGGGGAAGACTTGGGCCCTTTAAATAGCAAGGAACTTGAGCAGCTTGAGAGGCAGCTGGATTCATCACTCAAGCAAGTGAGGTCCACAAAGACCCAGTTCATGTTGGACCAGCTTTCTGATCTTCAAAACAAGGAGCAAATGCTGATTGAAGCCAACAGAAGTTTGACCGGCAAGCTAGAAGAACTGAACTCAAGAACCCAGTACAGGCAATCATGGGAAGCTGGTGATCAAAGCATGCAATATATGCAACAGAATGCTCACTCTGAGACCTTCTTCCAGCCTCTGGAATGCAATCCAACATTGCAGATAGGTCCTGAATACAGGTACAATCCTGTAGCTTCAGATCAGATGCCTGCCACAACTCAAGCCCAACAAGTGAATGGCTATATTCCTGGATGGATGCTTTGA 744 0.457 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSTRGKLYEFCSSSSMLKTIERYQKCSYGSLEVSKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLNSKELEQLERQLDSSLKQVRSTKTQFMLDQLSDLQNKEQMLIEANRSLTGKLEELNSRTQYRQSWEAGDQSMQYMQQNAHSETFFQPLECNPTLQIGPEYRYNPVASDQMPATTQAQQVNGYIPGWML 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02529 247 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach8g02529 247 Gene3D - 13 83 IPR036879 GO:0003677|GO:0046983
Bach8g02529 247 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach8g02529 247 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach8g02529 247 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach8g02529 247 Coils Coil 124 144 - -
Bach8g02529 247 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Bach8g02529 247 SUPERFAMILY SRF-like 2 81 IPR036879 GO:0003677|GO:0046983
Bach8g02529 247 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach8g02529 247 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach8g02529 247 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach8g02529 247 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach8g02529 247 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 187 - -
Bach8g02529 247 FunFam MADS-box transcription factor 1 13 87 - -
Bach8g02529 247 Pfam K-box region 85 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02529 Bach-Chr8 31382574 31387537 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach8g02529 K-box 2e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g00533 1 7046009 7050967 Bach8g02529 8 31382574 31387537 BWGD
Bach8g02529 8 31382574 31387537 Bach8g02529 8 31382574 31387537 ECH