Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02454 ATGTTTTCTTCCAGTTATAGTTCCAACCCTTTCCCTTGCTTTCCCTCATCTTCTTCTTCTTCTTACCCTCCTCATCTTCCTTTTCTAACCCATGAGAATGCAGCTGCTTCTGCAGACAACATCCTCATTCTTCATGACCCACTTGCAGCTATTCCCTTCATAAACACAAATAATGCTCCAATCCCAGAACCAGCCACCAATTTGGTTGTTGCTGCAGACTGTCCTGCTAGAATCGGCAAGCAAGAGGATACTCCCTTTGCTCCCCATTTTCTCACCACCAAGAGGGCACCCAAGAAAGATAGACACAGCAAGATTTACACATCGCAGGGTTTGAGGGATCGGAGGGTGAGATTGTCCATCGATATCGCCAGGAAGTTCTTTGATCTTCAAGACATGCTAGGGTTTGATAAAGCAAGTAACACCCTAGAGTGGCTCTTCACCAAGTCGAAGAACGCAATTAAAGATCTAGCTCGAAGTAAGAATAGCTCAAGTGCAGGTGGTGGTGACGGCGGTGGTGCCAAGAGCTTCTCTTCCTCTTCTGAGTGTGATGAAGTGGTTTCAGGGATCAACCAAATCAGCAACATGGATATTGTGCCAAACCTAAAAGAGAATGATGATTCCTATGAAAAGTCATTGATGGGTTTTGATGCTGCTGCTAAAGAGAAGATCAAGCTGAAAAGAGCACAGAAGGATCAACCTGTTTGTGTAAGGGCAAAGAAGGAATCAAGGGAAAAAGCAAGAGCAAGAGCAAGGGAAAGGACAAGTTACAAGATGTGTACTACCACTAGCACTGGGAGAGTGCAAGAGAAAAGATGCTCTGCTACTGAAAATCCTCAAACCCTGCACCAATTGAGGTCGCTCACTACCCAACCTGCAGAAGCCTCCTTAAAATCACCCAGGTTGCTTCAACCTCACCCGCGCCCTCACCCAGCAACTAGCAAAGCACAAAGAGACAACTTAAATTTTATTGAGGAATCTATTGTGATCAAGAGGAAGTTGAAGCCACCCATGATTCCTTCTCATCACCAAAACCTTGTGATCCCCAAAGAAACAACTCTCGACCAAAATGAGCAGCACCCATTTCCCAATTTGGCTACAAATTGGGACACTAATGGTGCAATTGGGCGCTCTAGCTTTTGTGCTTTTGCCAGCATGAATCTATCTACCGAGCTTCAGATCTTTGGGAAGCCTTGGGAGGAGTGCAACAATCAGCAACGTTTACCATAA 1227 0.4531 MFSSSYSSNPFPCFPSSSSSSYPPHLPFLTHENAAASADNILILHDPLAAIPFINTNNAPIPEPATNLVVAADCPARIGKQEDTPFAPHFLTTKRAPKKDRHSKIYTSQGLRDRRVRLSIDIARKFFDLQDMLGFDKASNTLEWLFTKSKNAIKDLARSKNSSSAGGGDGGGAKSFSSSSECDEVVSGINQISNMDIVPNLKENDDSYEKSLMGFDAAAKEKIKLKRAQKDQPVCVRAKKESREKARARARERTSYKMCTTTSTGRVQEKRCSATENPQTLHQLRSLTTQPAEASLKSPRLLQPHPRPHPATSKAQRDNLNFIEESIVIKRKLKPPMIPSHHQNLVIPKETTLDQNEQHPFPNLATNWDTNGAIGRSSFCAFASMNLSTELQIFGKPWEECNNQQRLP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02454 408 Pfam TCP family transcription factor 97 260 IPR017887 -
Bach8g02454 408 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 92 371 IPR005333 GO:0003700
Bach8g02454 408 ProSiteProfiles R domain profile. 240 257 IPR017888 -
Bach8g02454 408 MobiDBLite consensus disorder prediction 290 315 - -
Bach8g02454 408 ProSiteProfiles TCP domain profile. 98 156 IPR017887 -
Bach8g02454 408 MobiDBLite consensus disorder prediction 158 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02454 Bach-Chr8 30447267 30448574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02454 94 161 TCP Transcription Factor Family AT1G67260 72.059 4.66e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bach8g02454 TCP 9.1e-45 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g02454 8 30447267 30448574 Bach5g00530 5 3607934 3609249 ECH
Bach8g02454 8 30447267 30448574 Bach8g02454 8 30447267 30448574 ECH
Bach2g01892 2 26852017 26853297 Bach8g02454 8 30447267 30448574 ECH