Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00025 ATGGGTAAGAAGGGTGGTGTTGCTGTTCAAATATTAGTGGTGGTGGTAACAATTGCAATCTGGTGTCTTGACGCAAATGAAGCTCTTGGGTTCAAGTGCAGGTCAGACTCAGTTATATGTCGTGCCCTCATCGATTACACTTCACCAAATGACACCAATTACAGGGCAATCCAGAATCTGTTCAACATCAAACACCTCATCGACATTGTGGGGGCCAACTCCCTTCCACCCAACACCAGCGGTAGCGATCCCGTCAACAAAACCCAGACTATCCGAATCCCTTTCAGCTGCAACTGTACCAACTCCACCGGATTATCGAACCACCGTCCCAAGTACACCGTGCAGAGCGGGGACACCCTCTACCATATAGCCAAGGAAGTCTTCTCGGGACTGGTGACATGGCCAGAAATCCAAGAAGCGAATAAAATACCGGACGCAAACAAGATAGAGGTAGGGCAGGAGTTTTGGATTCCATTGCCTTGTAGCTGCGATCAGGTGGATGGCGCCGCGGTGGTACACTATGGACACGTGGTTGCTAATGGCAGCACCGTCCAACAGATAGCTCAGCAGTACGGCACTACACAGGAAACTCTCCTCAATCTCAATAATATGACCGATCCAAACCAACTTCAAGCCGATCAGATTTTCGATGTTCCCCTCAAAGTTTGTTCCTTGGCGGTGAAAAATGGGTCATTGGACTCCTCTTTGCTTGTTGCCGATGGAACTGACCTCTACACAGCAAATGGCTGTGTCAGGTGCAAATGTGACTCTGCCAACAACTTGACAGTGCAATGCGAGCCATCGCAGGCTAAGCCAACCAACTGGTCTACTTGCCCATCAATGCAATGTCAAAGTTCTAATTCTGTCCAACTCTTGATCGGCAACGCAACAGATTCTTGCCCACGAACAGCCTGTGCCTATGCTGGTTATACCGCCAACAATACCATCTTCACTAATCTTGTCACTGATTCCACTTGTGCTGCATCAGGTGCATCGAGGACCAACTTCCAAGGCTCGGCTTCCAATCTTGTTTTGATTGCCATTCACTTGATCCTCCTTTCTCTCAATCTTCGCTACTAA 1080 0.4861 MGKKGGVAVQILVVVVTIAIWCLDANEALGFKCRSDSVICRALIDYTSPNDTNYRAIQNLFNIKHLIDIVGANSLPPNTSGSDPVNKTQTIRIPFSCNCTNSTGLSNHRPKYTVQSGDTLYHIAKEVFSGLVTWPEIQEANKIPDANKIEVGQEFWIPLPCSCDQVDGAAVVHYGHVVANGSTVQQIAQQYGTTQETLLNLNNMTDPNQLQADQIFDVPLKVCSLAVKNGSLDSSLLVADGTDLYTANGCVRCKCDSANNLTVQCEPSQAKPTNWSTCPSMQCQSSNSVQLLIGNATDSCPRTACAYAGYTANNTIFTNLVTDSTCAASGASRTNFQGSASNLVLIAIHLILLSLNLRY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00025 359 CDD LysM 176 214 IPR018392 -
Bach7g00025 359 ProSiteProfiles LysM domain profile. 110 157 IPR018392 -
Bach7g00025 359 SMART LysM_2 111 158 IPR018392 -
Bach7g00025 359 SMART LysM_2 175 219 IPR018392 -
Bach7g00025 359 SUPERFAMILY LysM domain 111 159 IPR036779 -
Bach7g00025 359 Gene3D LysM domain 167 224 IPR036779 -
Bach7g00025 359 CDD LysM 112 157 IPR018392 -
Bach7g00025 359 ProSiteProfiles LysM domain profile. 174 218 IPR018392 -
Bach7g00025 359 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 23 330 - -
Bach7g00025 359 SUPERFAMILY LysM domain 175 219 IPR036779 -
Bach7g00025 359 Gene3D LysM domain 107 166 IPR036779 -
Bach7g00025 359 Pfam LysM domain 176 219 IPR018392 -
Bach7g00025 359 Pfam LysM domain 112 158 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00025 Bach-Chr7 430268 432129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00025 11 349 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 44.348 2.58e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00025 - - twl:120001966 365.54