Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01113 ATGGTTTTTTCCTCCATCCCAGCTTATCTTGATCCAGCCAACTGGCAACAACAGCAACCAGGTCATCAAACTGGTGGAAGCAGCGGCCCAAGTTCTCAGCTTCTTCCACCTCCTCCTCCACCGGCACCACCCACGCAACCTCACGGTGCAGGGGGCACGGGCTCCATCAGGCCAGGTTCTATGGCTGATCGAGCCCGTATGGCTAACATACCTATGCCAGAGACTGCACTAAAATGCCCACGATGCGAATCCACAAATACCAAATTTTGCTACTTCAACAACTATAGCCTCTCACAGCCCCGTCACTTCTGCAAGACCTGCAGAAGGTACTGGACAAGAGGTGGGGCCATGAGAAATGTCCCCGTAGGCGGCGGCTGCCGGAGGAACAAGAGAACCAAAGGAAGTGGTAGCTCAAAGTCTCCCGTGAGCTCAGATCGCCAAACGGGTAGCGCTAGTTCAACAAACTCAGTCTCTTCTAACAGTGGTTCTGCTGCTGATATAGTTGGCCTCGGACCTCAGGCTCCACCACTAAGGTTCATGGCCCCACTACATCAACTAACGGATTTTGCTGCAGGAGACATTGCCTTAAACTATGGCCTCAATTACAGCGCAATCTCAGCACCAATGGGGGCAGTAGGCGACTTAAATTTTCATATAGGTGGTGCTTTGGGAGGAGCAAGTGGCGGCAACGGTGGTGCCAGTGGCGGTTCTATCTTCTCAGCAGCTGGATTGGAACAATGGCGTGTGCCACAAACACATCAATTTCCATTTTTGGCTGGTTTGGAAGCTTCACATGGGCTGTACCAATTTGAAGCTGGTGCCGAGGGAGCGGGATATGGTGGTGCCGGAGGTGCGGCTTCGGTCCGGCCGAAGGGAACTACTTCCGGGCTGATAACTCAGCTTGCTTCAGTGAAAATGGAAGACAATCAGGAATTGAATTTGTCAAGGCAGTTCTTGGGAATCAATAATCCAGGGAGTGATCAGTATTGGGGTACTACTGCTGGTGCTACTGCAGCATGGACAGATCTTTCTGGGTTTAGTTCTCCCTCCACTACTAGCAATCAATTATAG 1071 0.5163 MVFSSIPAYLDPANWQQQQPGHQTGGSSGPSSQLLPPPPPPAPPTQPHGAGGTGSIRPGSMADRARMANIPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRNKRTKGSGSSKSPVSSDRQTGSASSTNSVSSNSGSAADIVGLGPQAPPLRFMAPLHQLTDFAAGDIALNYGLNYSAISAPMGAVGDLNFHIGGALGGASGGNGGASGGSIFSAAGLEQWRVPQTHQFPFLAGLEASHGLYQFEAGAEGAGYGGAGGAASVRPKGTTSGLITQLASVKMEDNQELNLSRQFLGINNPGSDQYWGTTAGATAAWTDLSGFSSPSTTSNQL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01113 356 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Bach6g01113 356 MobiDBLite consensus disorder prediction 118 164 - -
Bach6g01113 356 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 50 172 IPR045174 GO:0003700|GO:0006355
Bach6g01113 356 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Bach6g01113 356 MobiDBLite consensus disorder prediction 10 60 - -
Bach6g01113 356 MobiDBLite consensus disorder prediction 135 164 - -
Bach6g01113 356 MobiDBLite consensus disorder prediction 32 47 - -
Bach6g01113 356 MobiDBLite consensus disorder prediction 10 31 - -
Bach6g01113 356 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01113 Bach-Chr6 9281012 9282268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01113 1 320 C2C2-Dof Transcription Factor Family AT5G02460 40.769 3.47e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach6g01113 zf-Dof 7.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01113 - - rcu:8279572 396.356