Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00545 CAAACTCAAACATAGAAAGGAAGAGGCCAAACACCCTCTTTTGCTCTCGTTTGTTCCTACCTACCCTGTTCCTTTTTGGCATGTCCATCTTCTTCAACAGTGCTTGTTAAACTAGTTGTTGTGATTGTTTTACGTGAACAAGAAAGAATGGCCTCTTCCTCCGAACTAGGCCTGGATTACAAACCCCATAGCTATTCCATGCTACTCAAATCTTTTGGAGATCAACAGAGTGATCATCAGACTTACAAGCTTGAGGAATACCTTTCTCGCCTGGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAACTTCTTACCGACGCTATGGAGGGTTTAAGGCAGCAACTACAGCCTTTTAGAGGAAATCAAGGCACAAGACCAGTTCTTGAGGAATTCATACCCTTAAAGCATTCAACCTCTGAAAGCTCTGAAAAGGCAACAAACATGTCTGACAAGGCAAATTGGATGACATCTGCTCAACTATGGAGCCAAGCAAGTGAAGGAAGCAATCCACAATCCACAATTACATCACCCAAAGAATCTGATATTGGCTTCAACGTTAGCCCTAAGCTAGCTGTAGACAGCAAACAGAGGAATGGTGGAGCCTTTCTTCCATTTTCAAAAGAAAGAAACTCGTGCCCTGGCTCTGCATTGCGGGCTTTCCCTGAGCTTGCTCTTTCTTCCGCTGAGAAAGAAGTGGAGGACAAGAAATGTGCAGAGCCTGAAAATGGAGCATCATGTCTAAATAGGGATAATTCTGGCAAAGTAGGGAGTGGTGGGGTGGTGATTGATCAAGGAAAAGGACCCGCAGCTGCATCTGAGCCACAGACAACCAATAACACAAGTACTACACAAACTCATAGAAAAGCAAGAAGGTGCTGGTCACCAGACTTGCACCGCAGATTTGTTAACGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCCACGCCAAAACAAATCAGGGAGCTGATGAAGGTTGATGGTTTGACCAATGATGAAGTTAAAAGCCATCTTCAGAAATATAGGCTTCACACTAGACGACCCAGTACAAGCCCACACGCAGGCGGAGCACCCGCACCGCAGCTCGTAGTTCTAGGAGGGATTTGGGTCCCACCAGAGTATGCCACGGCAGCAGCGGCCGCCCCTGCCCTCTATGGCCCACACCCTACCTCCCATGCGCCACCACCTCACTATTGCACTGCCACCCCGGTGCCCCAGGACTTCTACACTGCTACCCCGGCGCAGCCGCCGCTGCCACCGCAACCGCACCATCACGCGCTCCATCACCACCTCCACATGTACAAAACGGCGTCTCACACCTCGCCGGAAACTAACGTTCGTGGAGCGGGTGACCGATCGGAGAGTATCGAAGATGGCAAGTCCGAAAGCAGCAGTTGGAAGGGGGAGAGTGGTGAGAACGAAGGAGACAGAAAAGGATTGGCTGCGCTTAGAGATCAAGATGGAGAAGACAGTAATGGGAGTGACATCACTCTTAAATTCTAGGGCTAATTATTGGGATATTATTTCAGGATTGGAGTTAGACTTAGGTTTTTTTCGTACATGCTCGCCTCCCATCCTTACCTATATGAACACCAATTCATGATTTCATTCAACAAGAGAAGCAAAA 1648 0.4824 MASSSELGLDYKPHSYSMLLKSFGDQQSDHQTYKLEEYLSRLEEERLKIDAFKRELPLCMQLLTDAMEGLRQQLQPFRGNQGTRPVLEEFIPLKHSTSESSEKATNMSDKANWMTSAQLWSQASEGSNPQSTITSPKESDIGFNVSPKLAVDSKQRNGGAFLPFSKERNSCPGSALRAFPELALSSAEKEVEDKKCAEPENGASCLNRDNSGKVGSGGVVIDQGKGPAAASEPQTTNNTSTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSTSPHAGGAPAPQLVVLGGIWVPPEYATAAAAAPALYGPHPTSHAPPPHYCTATPVPQDFYTATPAQPPLPPQPHHHALHHHLHMYKTASHTSPETNVRGAGDRSESIEDGKSESSSWKGESGENEGDRKGLAALRDQDGEDSNGSDITLKF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00545 458 MobiDBLite consensus disorder prediction 395 458 - -
Bach5g00545 458 MobiDBLite consensus disorder prediction 229 247 - -
Bach5g00545 458 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 304 IPR017930 -
Bach5g00545 458 MobiDBLite consensus disorder prediction 408 452 - -
Bach5g00545 458 MobiDBLite consensus disorder prediction 121 140 - -
Bach5g00545 458 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 425 IPR044787 GO:0003700|GO:0006355
Bach5g00545 458 SUPERFAMILY Homeodomain-like 244 305 IPR009057 -
Bach5g00545 458 MobiDBLite consensus disorder prediction 194 251 - -
Bach5g00545 458 NCBIfam myb-like DNA-binding domain, SHAQKYF class 247 302 IPR006447 GO:0003677
Bach5g00545 458 FunFam Myb family transcription factor 246 304 - -
Bach5g00545 458 Pfam Myb-like DNA-binding domain 249 300 IPR001005 -
Bach5g00545 458 Coils Coil 35 55 - -
Bach5g00545 458 Gene3D - 246 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00545 Bach-Chr5 3747679 3750196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00545 1 458 G2-like Transcription Factor Family AT2G03500 50.725 2.96e-133 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bach5g00545 Myb_DNA-binding 9.9e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00545 5 3747679 3750196 Bach2g01872 2 26694727 26696940 BWGD
Bach5g00545 5 3747679 3750196 Bach5g00545 5 3747679 3750196 ECH