Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00562 TTTCCCTCTTGCTCCCATTAAAATCCCCTCTTCATCTGCCACACTAGACAAGTGCTTCTCTCACTTACTCCTCTCATTCTCACAGCCTTCTTATAACCAGAGACAAGTGCTTCTCCACGTATTCGCATTTGCAGAACTGTTAATCCCAAAAGGACCAGATGCCATCGGAATCCGGTGAGAGTCGACGAGCAGTCAAGTCCCAACACCCGGGAGCTCCACCACCGGAACAAGAGCATCTTCCCTGCCCTCGTTGCGACTCCACCAATACAAAGTTCTGTTACTACAACAACTACAACTTCTCACAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGGTACTGGACTCATGGCGGCACCCTTCGTGACATCCCAGTAGGCGGTGGCAGTCGTAAAAACGCCAAGCGCTCCCGTGCTTGCCCTGCAACTTCTTCTTCCTTTGCTGTCACTTCAGGTTCTGCTCAGGAACCATTGCCCGCGACCCCCGTATTGATGCCTATTGCTGCCAACCAAGTTGCGTCTATACAGTTTGCCGCGACTAGTGGTGTTGATGGTGATGTCAAGCCTAACATGAATGCGTGTGGAAGCTTCACTTCGTTGCTTAACAATACCCAAGCTCCTACCTTTCTTGCTTTAGGTGGCTTCGGATTGGGGCTTGGACATGGTTTTGAAGATATGGGATTTGGGATTGGAAGAGGCGGTTGGCCTTTTCCCGGGATGGTAGACGGTAATGGTAACGCTGCTGGAGCTGTTGGTGTCCCTGGGGTTAGCAATTCATGGCAATTACAGAGTGGAGAAGGTGGATTTGTTGGTGGAGACTGCTTCTCTTGGCCCGGGCTGGCGATTTCAACACCTGGGAATGGTCTGAAATAAATGCCATCGGAATCCGGTGAGAGTCGACGAGCAGTCAAGTCCCAACACCCGGGAGCTCCACCACCGGAACAAGAGCATCTTCCCTGCCCTCGTTGCGACTCCACCAATACAAAGTTCTGTTACTACAACAACTACAACTTCTCACAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGGTACTGGACTCATGGCGGCACCCTTCGTGACATCCCAGTAGGCGGTGGCAGTCGTAAAAACGCCAAGCGCTCCCGTGCTTGCCCTGCAACTTCTTCTTCCTTTGCTGTCACTTCAGGTTCTGCTCAGGAACCATTGCCCGCGACCCCCGTATTGATGCCTATTGCTGCCAACCAAGTTGCGTCTATACAGTTTGCCGCGACTAGTGGTGTTGATGGTGATGTCAAGCCTAACATGAATGCGTGTGGAAGCTTCACTTCGTTGCTTAACAATACCCAAGCTCCTACCTTTCTTGCTTTAGGTGGCTTCGGATTGGGGCTTGGACATGGTTTTGAAGATATGGGATTTGGGATTGGAAGAGGCGGTTGGCCTTTTCCCGGGATGGTAGACGGTAATGGTAACGCTGCTGGAGCTGTTGGTGTCCCTGGGGTTAGCAATTCATGGCAATTACAGAGTGGAGAAGGTGGATTTGTTGGTGGAGACTGCTTCTCTTGGCCCGGGCTGGCGATTTCAACACCTGGGAATGGTCTGAAATAAACTTTTTTATTGGTTTTCGAGCTCCTTCAATGAAGGGAAGTTACTGTGATGGTTTAGAGTTTAGGTTACCGCGTGTTTCTAGAATATCAGCAATCAAATTAGAGAAACATGTATGACTTTTTTCTGATTTGGGATTCTACTGTTGTCAATGTTACTACTTTTTTAGTGATCAAGGTTGTGTGTGAATTTGTTAGTAGCTCACATCATTTACGTT 1794 0.4994 MPSESGESRRAVKSQHPGAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRACPATSSSFAVTSGSAQEPLPATPVLMPIAANQVASIQFAATSGVDGDVKPNMNACGSFTSLLNNTQAPTFLALGGFGLGLGHGFEDMGFGIGRGGWPFPGMVDGNGNAAGAVGVPGVSNSWQLQSGEGGFVGGDCFSWPGLAISTPGNGLK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00562 236 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 150 IPR045174 GO:0003700|GO:0006355
Bach4g00562 236 MobiDBLite consensus disorder prediction 1 29 - -
Bach4g00562 236 ProSiteProfiles Zinc finger Dof-type profile. 27 81 IPR003851 GO:0003677|GO:0006355
Bach4g00562 236 Pfam Dof domain, zinc finger 25 81 IPR003851 GO:0003677|GO:0006355
Bach4g00562 236 ProSitePatterns Zinc finger Dof-type signature. 29 65 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00562 Bach-Chr4 3794621 3795703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00562 1 236 C2C2-Dof Transcription Factor Family AT3G50410 51.362 4.77e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach4g00562 zf-Dof 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00562 - - qsa:O6P43_033783 359.377