Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00555 ATGATTCAAGAACTGTTAGGAGGTGCTGGCCTTATACCAGGAGAAAGGAAATTCTCCATTAACGGAGGGGTTTTAGCTGCCACACCATCTCCTAATTCTCTCCCTTCTTCTTCTCCGTGTCCTAATTCTTCCACAACCACCACCACTAACACTTCCACTACTAGCACCACTACCACCACTGCTGCCACTACCACCTCGTCAAATTCAGACAACCAAAATCTGAGGTGCCCGCGTTGTGATTCATCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGTCATTTCTGCAAGACATGTCGCAGGTACTGGACAAAAGGCGGTGCTCTGAGGAATGTTCCTATCGGAGGCGGCTGTCGGAAAAACAAGAACGTCGGCATGTCCAACACCGTGGCAAAGGCGAGTGTGGCTAAGATGAAAACTGTGGCATCTGAGCTTGGAAGGTCAGGACTTGGGGGTGGGTTTGATCATGAGCTTCCTTCAAGTCCAGTTCTATGGGGTTCACCACAAAATTCTCATCTGTTGGCTTTGCTGAGAGCTGGACAAAACCAAAACCCTAACCCTAGCCCTAGCCCTCTGTCCAATGGTATTGCTGTGAAGGAAGAAGGGCACTTAATGGGAACTCACATGGTCACTCATGAGCCATTGGTTGCAAATGGGTTATTTAATGCTCGAACCCTAGGTTTTGACCCTATTGGACAAGTTCCTTCTCTTGGTTTGGGCAGCTCTTTTTGGAGAAACAATCAAGATCAACCTCAACAACAAAATGTTAATTTTGTATTAGGTGAACATCAAAACAGTGGAATTCAGGAACTCTATCAGAGGCTCAGGTCATCATCAGCTAATTACTGTGGCGAAAACTCAACAATGTTTCTGGGCAACATGACTTCTTCATCTTCCTCTTCTTTATCCATATTGGAGTCAGCTCCAGTTGCTGGGGGTGAATTGGGGTACTGGAATCCAACCCTTTCGTGGTCTGATCTTCCCACAACCAATGGTGCATATCCATAA 1023 0.4633 MIQELLGGAGLIPGERKFSINGGVLAATPSPNSLPSSSPCPNSSTTTTTNTSTTSTTTTTAATTTSSNSDNQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNVGMSNTVAKASVAKMKTVASELGRSGLGGGFDHELPSSPVLWGSPQNSHLLALLRAGQNQNPNPSPSPLSNGIAVKEEGHLMGTHMVTHEPLVANGLFNARTLGFDPIGQVPSLGLGSSFWRNNQDQPQQQNVNFVLGEHQNSGIQELYQRLRSSSANYCGENSTMFLGNMTSSSSSSLSILESAPVAGGELGYWNPTLSWSDLPTTNGAYP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00555 340 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Bach4g00555 340 MobiDBLite consensus disorder prediction 29 74 - -
Bach4g00555 340 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Bach4g00555 340 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 60 269 IPR045174 GO:0003700|GO:0006355
Bach4g00555 340 Pfam Dof domain, zinc finger 72 128 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00555 Bach-Chr4 3762561 3763583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00555 34 127 C2C2-Dof Transcription Factor Family AT5G65590 60.638 2.41e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach4g00555 zf-Dof 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00555 - - qsu:112033100 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00555 4 3762561 3763583 Bach4g00555 4 3762561 3763583 ECH
Bach4g00555 4 3762561 3763583 Bach10g00490 10 3528027 3529037 PCT