Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00490 ATGGCTCTCAGAAAAGAATCACAAGATGTGGAAGACTCTGCGTTAGTCCTTGATACGCTCCTCTGCGAAGAAGATAGTTTTGGGGAGGATTTTGGTGAGAATGGTATTGAGGGAGAGCGTGATAACTATGATTCAACCGTGAGAAAGTCGTCATCTTTGATTTTGTTGGACAAGGACTTGTTTTGGGAAGACGATGAACTCGTCTCCCTAATCTCTAAAGAGCGAGAAACCCATTTATGTTTAAGTAATCTAATTGGCGACGGGCCTCCGGAGGGAGCTCGTGTTGAGGCTGTGCGATGGATTTCTAAAGTTTGTGCACACTATGGTTTCTCTGCTTTGACTACCGTTCTCGCTGCGAACTACTTCGATAGGTTCACTACCAGCCTAAGGTTTCAGAGGGATAAGCCATGGATGATACAGCTCACGGCCGTTGCCTGTTTATCTCTGGCTGCCAAAGTGGAGGAGACCCAAGTGCCACTTCTTTTAGACCTGCAAGTGGAGGAATCGAAGTACGTGTTTGAAGCTAAGACTATACAGAGAATGGAGCTTCTAGTGTTATCAACTCTTAAATGGAGAATGAATCTAGTGACCCCAATTTCCTTCTTCGAACACATTGTAAGAAGGCTCGGTTTGAAGTGCCGCTTGCATTGGGAGTTCATGTGGCAGTGCGAGCGTGTTCTTCTCTTTGTCATTGTTGATTCAACGGTTATGAGTTATCTTCCTTCTACATTAGCCGCTGCTATAATGATCCACGTTATTTCAGAGATCGAGCCATGTAAGGCAATGGACTACAGAAATCAGCTTCTTAGTTTACTCAAAATCAGTGAGGAACAAGTGAGCGAATGCTACAAACTCATACTGAAACTGTTTGGATGCCAGGAAGAGATTCAAAATCTTCACCAGAAACGCAAGCGCTTATCTGTGCCAAGTAGTCCAAGTGGCGTCATTGATGCATCTTTCAGCTATGATAGCTCAAATGACTCTTCGGCTCTGGCATCATCAGTCTCATTTTCATTGGAGCCAGTGTTAAAGAGGAGCAGAGCTCAGGAACAACAGATGCACTTTCCTTCCCTAAATCATGTGTCTATTGATGTGCTTAATAGTCCTCGCTAA 1113 0.4429 MALRKESQDVEDSALVLDTLLCEEDSFGEDFGENGIEGERDNYDSTVRKSSSLILLDKDLFWEDDELVSLISKERETHLCLSNLIGDGPPEGARVEAVRWISKVCAHYGFSALTTVLAANYFDRFTTSLRFQRDKPWMIQLTAVACLSLAAKVEETQVPLLLDLQVEESKYVFEAKTIQRMELLVLSTLKWRMNLVTPISFFEHIVRRLGLKCRLHWEFMWQCERVLLFVIVDSTVMSYLPSTLAAAIMIHVISEIEPCKAMDYRNQLLSLLKISEEQVSECYKLILKLFGCQEEIQNLHQKRKRLSVPSSPSGVIDASFSYDSSNDSSALASSVSFSLEPVLKRSRAQEQQMHFPSLNHVSIDVLNSPR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00490 370 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Bach4g00490 370 Gene3D - 93 194 - -
Bach4g00490 370 SMART cyclin_7 99 187 IPR013763 -
Bach4g00490 370 CDD CYCLIN_AtCycD-like_rpt2 196 286 - -
Bach4g00490 370 Gene3D - 195 284 - -
Bach4g00490 370 Pfam Cyclin, N-terminal domain 90 194 IPR006671 -
Bach4g00490 370 SMART Cyclin_C_2 196 324 IPR004367 -
Bach4g00490 370 FunFam D3-type cyclin 90 194 - -
Bach4g00490 370 SUPERFAMILY Cyclin-like 178 298 IPR036915 -
Bach4g00490 370 SUPERFAMILY Cyclin-like 61 194 IPR036915 -
Bach4g00490 370 FunFam CYCLIN D32 195 284 - -
Bach4g00490 370 PANTHER CYCLINS 70 294 IPR039361 -
Bach4g00490 370 Pfam Cyclin, C-terminal domain 196 299 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00490 Bach-Chr4 3288789 3290265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00490 1 360 Core Cell Cycle Gene Families AT5G67260 51.902 2.47e-111 329
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00490 4 3288789 3290265 Bach11g00290 11 2003416 2004947 BWGD
Bach10g00429 10 3017735 3019257 Bach4g00490 4 3288789 3290265 BWGD
Bach4g00490 4 3288789 3290265 Bach10g00429 10 3017735 3019257 ECH
Bach12g00273 12 1832855 1834462 Bach4g00490 4 3288789 3290265 ECH
Bach3g02214 3 29125297 29126760 Bach4g00490 4 3288789 3290265 ECH
Bach4g00490 4 3288789 3290265 Bach4g00490 4 3288789 3290265 ECH