Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02434 ATGGTTACCACAACTGATTCTTCTTCTAACCAACACTCGCCGACTAGTGCTGGAATATCTGGGACTGGGGATAGCAATAGCCCTAAGTTCCAGCGAAAAAACCTGCCGTCTCCCTGGGCTCAAGTTGTCCGAGGTGGTGAACCCGAATCAACATCGGGCATTCACCAATCGCCGCCGTCATCGTCTTCTTCTTCGTCATCGCTGACTACCTCTGTGCCGGACCCGACACCATCGTCTGATTCCTCCCCGAAGGCGGCTGCTGCTTTACTGCCGGTGGATAATTTTAATACTGCCGCTGCAGATACCTCTGATAGTAATAACAGCAATGCGGGTCGGCTAAAGAAGCCTGCTTGGAACAAGCTCTCTAACGGCGTTGTCGATGTTGGTCCTGTAATGGGCGCGGTCTCTTGGCCAGCTTTATCTGAATCCACCAAGGCTTCGGTTAAAATGTCAGCTGACACGTCCACCAAGAGTGTCCCGGATGGATCGCTCCCAAGTTCTCAGGGGCCTGTTACTTCACATTCACCTCAGAAGCAAGGTACGAGTAATGCAAAGCAAAATTCTTCCAACTATAATCGGCAAAGATCAGTGAAGCGAGGTGGTGGCAACAACATTGGGGCTGGTCCTGCACAGAGCAGCTTCTCTAACCCTCCCCCACCTCCCCCGCCACCACCCTTTCCTGTATTTCAGGTCCCTCCAAGTAGCTATGGTAATTTGGTACCAGGAGTTCCTGATTATTCTTCAAGAAACTGGGATACGAGACCACCTGTTAGTAGCTTTGTGCCAGCGGTGAATGATCATAGGAATTCCTCTCGGAGGGGTAACTTTGGCCCCCATCCTCGTGGAGATGGCCACTATCATAACAATCATGGAGGGAGACGTGATCAGGATCGTGCAAATATACACCAACAAAGGGTGCCTCCAAGGGGATTAGTAAGGCATCCACCACCTAATGCTGCTGCATTTGTGGCACCTCAGCCCATAGGAGGACCATTTGCGAACCCCATGGGTTTTCCTGAATTCTATTATTTCCCAACACCACCATTGGAACCCTTCAGGGGCATGCCGTTCTTTACCCATAGTCCTCCAGCTATATTCTACCCTGTTGCAGGGCCTCCTCTGACCAATATGATATTGAATCAAATTGAATATTACTTTAGTGATGGAAATTTAGTTAAAGATGAATTTTTAAGGTCCAATATGGATGAACAGGGATGGGTTCCAATTACTTTGATAGCAAGCTTCCCTCGAGTTAAAAGTCTAACAAGCAACGTTCAGTTGATACTGGATTCATTGAGAACTTCTACCGTTGTGGAAGTGCAGGGTGACAAGCTGAGGAGGCGCAATGAATGGATCAAGTGGCTGCCATCCGCTCAATTGCGGATTGATTCTGGTTCAGTATCCCCTGGAGGGTCTAGTTACAATAACCTATCCACTAATTTTCAAAAGATCACCCTGGAAGAAGCAATTACAGATAAAAGTAATATGGAGCCTATCACAGAGGCCTTTGCAGGAAGATTTCCTACAGAGTCTGAACTCCCAAATGGCGATGCAGCAAGGAATAGCAATTAA 1572 0.4809 MVTTTDSSSNQHSPTSAGISGTGDSNSPKFQRKNLPSPWAQVVRGGEPESTSGIHQSPPSSSSSSSSLTTSVPDPTPSSDSSPKAAAALLPVDNFNTAAADTSDSNNSNAGRLKKPAWNKLSNGVVDVGPVMGAVSWPALSESTKASVKMSADTSTKSVPDGSLPSSQGPVTSHSPQKQGTSNAKQNSSNYNRQRSVKRGGGNNIGAGPAQSSFSNPPPPPPPPPFPVFQVPPSSYGNLVPGVPDYSSRNWDTRPPVSSFVPAVNDHRNSSRRGNFGPHPRGDGHYHNNHGGRRDQDRANIHQQRVPPRGLVRHPPPNAAAFVAPQPIGGPFANPMGFPEFYYFPTPPLEPFRGMPFFTHSPPAIFYPVAGPPLTNMILNQIEYYFSDGNLVKDEFLRSNMDEQGWVPITLIASFPRVKSLTSNVQLILDSLRTSTVVEVQGDKLRRRNEWIKWLPSAQLRIDSGSVSPGGSSYNNLSTNFQKITLEEAITDKSNMEPITEAFAGRFPTESELPNGDAARNSN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02434 523 MobiDBLite consensus disorder prediction 213 231 - -
Bach3g02434 523 CDD LAM 376 448 - -
Bach3g02434 523 SUPERFAMILY "Winged helix" DNA-binding domain 366 456 IPR036390 -
Bach3g02434 523 SMART la 372 450 IPR006630 -
Bach3g02434 523 MobiDBLite consensus disorder prediction 1 125 - -
Bach3g02434 523 MobiDBLite consensus disorder prediction 1 34 - -
Bach3g02434 523 Pfam La domain 378 433 IPR006630 -
Bach3g02434 523 PANTHER LUPUS LA PROTEIN-RELATED 134 463 IPR045180 -
Bach3g02434 523 ProSiteProfiles La-type HTH domain profile. 368 457 IPR006630 -
Bach3g02434 523 MobiDBLite consensus disorder prediction 278 295 - -
Bach3g02434 523 MobiDBLite consensus disorder prediction 96 113 - -
Bach3g02434 523 MobiDBLite consensus disorder prediction 50 83 - -
Bach3g02434 523 MobiDBLite consensus disorder prediction 250 295 - -
Bach3g02434 523 MobiDBLite consensus disorder prediction 140 199 - -
Bach3g02434 523 Gene3D - 369 457 IPR036388 -
Bach3g02434 523 FunFam la-related protein 1B isoform X2 364 454 - -
Bach3g02434 523 MobiDBLite consensus disorder prediction 140 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02434 Bach-Chr3 30542468 30545275 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02434 3 30542468 30545275 Bach12g00071 12 512046 515760 BWGD
Bach3g02434 3 30542468 30545275 Bach3g02434 3 30542468 30545275 ECH