Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02404 ATGCCACAATGTACTTATTTCAGTATATGCGAGGCTTACTTTAAGAAGTATGCATCTAAAATTGGATATTTACGGGTGGATGCATTATCTCTTCTACTTTCCATGACTAATGTTTCTCCAAATTCTGACATTCTCGTAGTTGATATGGTTGGTGGCCTTCTGACTGACTGGTGCTGTGGCAGAGCGTTTAGGAGGTACAGGTTTTGTATGCAACTCATATCTAGGACAGACACCATATGCCATGGATATTGTGAAGATATTCAACTTCAGCGAAGAAACCTCCAAGAGGATCAAATGTCTTTATCAGTCGGTGTGGAGGATATATCTCTTTCGTCTGGAAATGATGTTTTTGATCTTGGTGCTGAGAGTACCGAGAATATTATGATTCCTTCTACAAGAGTTTGCAAATGTACAAAAGCTGGAGAAAAGGCGCAACAGGAAATGATTGACTCGTGGAAGGAAAATGGTTTTTCTAGCCTCTTGCAACATGCATGCACATTCTACAACTCGGAAAAATGGCCATTGGCTTGCAAATATCAGAGCCTTGGTTACGTGAACATCAGGGCCGATATTAGTCCACATACAGATTCAGACCTTACCATTTCCAGGCGAAAAGAGGATCAGAGGCGGTCGCATGAAGTATCTCAATTTCAGTTCCAGCTTTTGCATTCTCATTCCCAGTTTCATCACAATCCTTCTTTCACTCCTCATTCCTTTTCCTTTCTTCCTTCTTCTCCCAACCAATCGGTCGCTCAAGACGCACCTTCTGCTTTTGCTAAGCTTGCCTTGGGTCAAAGATATGAAATTGATAATTCCAAGTCACAGAGGAGTAATTCTGAAGTTTCTCCTAGTCTGGGCAAAATAGTTAATCAACCTTCACTTACAACCGAGAATTGCATGAGTGGAAAGCATCATGGTAAATCAAAAGTCGCAAGACCTGCAAAACTTCGGACACAAGGATCAAATACTGGATTGTTAACCAAGAAATTTGTCAATTTGACCCAGGAGGCTAAGGATGGTACCCTGGATCTCAATAGAACTGCTGAGATCTTGGAGGTTCAAAAAAGGAGAATATATGATATTACAAACGTGCTTGAAGGAATAGGGTTGATAGAAAAAACTTCAAAGAACCATATCCGATGGAAGGGATATGAGGAGCTGGGGGCAGGTGATCTAGATGATCAAGCTAGTAGACTAAAGGATGAACTCGAAAGTCTGTATGCTGAGGAATGCCAACTTGATGATTCTATAAGGTTTGCTATTAATATTTATTGGCAAATTTTTCGATGGTTGACTTATTTGTACCTTTTTTTGACTGAGGAAGATATTCTTAGCTTGCCATGCTTTCGGAACCAAACACTTATTGCAATCAAGGCTCCCCAAGCCAGTTTTATTGAAGTTCCCGATCCTGATGAGGATAATGGTTTCCAGCAAAGGCAGTACAAAATGATTGTTAGAAGCACCACTGGACCAATAGATTTGTATCTCCTGAGTAAACACAATGACAAGGATCAGGGTCCCAGTGTGAAGCAGGCTAAAAAAGAAGATCCATCATGGAATAGTAAGCACTGTAGAATGGAGGATCCAAGGTTACGTTTAGAAAGCCAATCTCAGAAAGACCCTTCTCAGACTTTCAATTCAAAGGAGTCACAGGCATCTGGCATTCAGAAAATTACTCCTACAGATTTTGATATTGAGAATGACTACTGGTTTCAATCAGATTCCACAGTGAGCCTATCTGATCTGTGGGCAACTGAGCAGTGGGTTCAGATGGATGAGCTCCTCCAAAATGATTGTTCCAACGAGGGAATGGCATTTGCTCATACATAA 1830 0.4093 MPQCTYFSICEAYFKKYASKIGYLRVDALSLLLSMTNVSPNSDILVVDMVGGLLTDWCCGRAFRRYRFCMQLISRTDTICHGYCEDIQLQRRNLQEDQMSLSVGVEDISLSSGNDVFDLGAESTENIMIPSTRVCKCTKAGEKAQQEMIDSWKENGFSSLLQHACTFYNSEKWPLACKYQSLGYVNIRADISPHTDSDLTISRRKEDQRRSHEVSQFQFQLLHSHSQFHHNPSFTPHSFSFLPSSPNQSVAQDAPSAFAKLALGQRYEIDNSKSQRSNSEVSPSLGKIVNQPSLTTENCMSGKHHGKSKVARPAKLRTQGSNTGLLTKKFVNLTQEAKDGTLDLNRTAEILEVQKRRIYDITNVLEGIGLIEKTSKNHIRWKGYEELGAGDLDDQASRLKDELESLYAEECQLDDSIRFAINIYWQIFRWLTYLYLFLTEEDILSLPCFRNQTLIAIKAPQASFIEVPDPDEDNGFQQRQYKMIVRSTTGPIDLYLLSKHNDKDQGPSVKQAKKEDPSWNSKHCRMEDPRLRLESQSQKDPSQTFNSKESQASGIQKITPTDFDIENDYWFQSDSTVSLSDLWATEQWVQMDELLQNDCSNEGMAFAHT 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02404 609 CDD E2F_DD 394 500 IPR032198 GO:0046983
Bach3g02404 609 Pfam Gcd10p family 8 55 IPR017423 GO:0030488|GO:0031515
Bach3g02404 609 Pfam E2F/DP family winged-helix DNA-binding domain 324 383 IPR003316 GO:0005667|GO:0006355
Bach3g02404 609 Gene3D - 390 500 - -
Bach3g02404 609 MobiDBLite consensus disorder prediction 500 556 - -
Bach3g02404 609 SMART E2F_TDP_2 318 383 IPR003316 GO:0005667|GO:0006355
Bach3g02404 609 MobiDBLite consensus disorder prediction 500 535 - -
Bach3g02404 609 MobiDBLite consensus disorder prediction 536 556 - -
Bach3g02404 609 FunFam E2F transcription factor 1 313 385 - -
Bach3g02404 609 Coils Coil 389 409 - -
Bach3g02404 609 Gene3D - 316 385 IPR036388 -
Bach3g02404 609 PANTHER TRANSCRIPTION FACTOR E2F 275 587 IPR015633 GO:0000978|GO:0006357
Bach3g02404 609 Pfam E2F transcription factor CC-MB domain 399 497 IPR032198 GO:0046983
Bach3g02404 609 SUPERFAMILY E2F-DP heterodimerization region 395 499 IPR037241 -
Bach3g02404 609 SUPERFAMILY "Winged helix" DNA-binding domain 322 381 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02404 Bach-Chr3 30372822 30379767 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bach3g02404 E2F_CC-MB 7.3e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02404 3 30372822 30379767 Bach3g02404 3 30372822 30379767 ECH