Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach3g02287 | ATGAGAGACGAAGGAGTGGGAACCGTGTTTGGCGAGGCTAACAGCATTCCACGTCCCAAATACGGCAACGCGATGCAATATTCCGATCCCAACCTCTCGTCGAGCACCGTAGGAGGTGGGGACGAAGATTTCTACACTCGTAAAAGCAGTGCTTCGATGATTAGCCCTGGCTATTACGACCCCAGCCGTATGAGCGGGGAGGGATCTCCCATGATGATGTCCCCATGGAATCAGACCGCTAACTCTCCATTTTCCAAGTCCCAGTGGTCTCAATGCGAAGATAACCTTCCACAGAACGGCCTCATCGGTTCTCTCCTTCGTGAAGAAGGCCATATCTATTCCTTGGCTGCCACTGGTGATCTCTTGTACACTGGCTCCGACAGCAAGAACATCCGCGTTTGGAAGAACCTCCAAGAGTACTGCGGATTCAAATCAAACAGTGGTTTGGTGAAAGCTATCATAATTTCAGGTCAAAAAATTTTCACCGGTCACCAGGACGGTAAAATTCGTGTCTGGAAAGTGTCTCCCAAGAACCCTAGCGTTCATAAGCGTGCAGGTACATTGCCCACCTTGAAAGATATATTCAAGAGTTCTATCAAGCCCAGCAATTACATAGAGGTTAGACGACATCGTACTGCTCTCTGGATTAAGCACTCCGACGCCGTTTCCTGCTTGAGCTTGACCAGCGACAAAATGTATTTGTATTCAGCCTCCTGGGACCGAACCATAAAGGTCTGGAGGATCTCTGATTCCAAGTGTCTGGAATCTATAAGCGCTCATGATGACGCCGTAAACTCCGTCGTGTGCGGGTTGGACGGATTGGTCTTCTCGGGATCAGCGGACGGAACCGTCAAGTTATGGCGGAGGGAGACACGTGGAAAGGGGACAAAGCACGCGGCGGTCCAGACGCTGTTAAAACAAGAGTGTGCTGTTACAGCCCTAGCAGTGAACATGTCCGGTTCCATTGTATACTGTGGATCTTCTGATGGAATGGTTAATTTCTGGGAAGGTGAGAAGCAGTATGCTCACGGTGGGGTCCTCAAGGGGCACAAGCTAGCAGTGTTGTGCCTGCAAGCAGCAGGAAATTTGGTGTTCAGTGGATCCGCTGATAAGACGATATGCGTGTGGAGAAGGGACGGGGTCATCCACACGTGCCTCTCGGTTCTAACGGGTCACAATGGGCCGGTCAAGTGCTTGGCGGTGGAGGAGGACCGAGAGTCATCTTCCAAAGGAGATCAACGGTGGATTGTGTACAGTGGTAGTCTCGATAAATCGGTCAAGGTATGGAGCGTATCAGAGATGGCGGTTGATTTGAATCAGATGGCTATGATGCAACAGCAAAGCCAATTCTCTGGTTCTGATGCGGATTCCATACCGTCGGACGGCAGCTTCTCTTCCGGCCGTGCCGGCCAAAACAGGAGGTACTGA | 1428 | 0.5098 | MRDEGVGTVFGEANSIPRPKYGNAMQYSDPNLSSSTVGGGDEDFYTRKSSASMISPGYYDPSRMSGEGSPMMMSPWNQTANSPFSKSQWSQCEDNLPQNGLIGSLLREEGHIYSLAATGDLLYTGSDSKNIRVWKNLQEYCGFKSNSGLVKAIIISGQKIFTGHQDGKIRVWKVSPKNPSVHKRAGTLPTLKDIFKSSIKPSNYIEVRRHRTALWIKHSDAVSCLSLTSDKMYLYSASWDRTIKVWRISDSKCLESISAHDDAVNSVVCGLDGLVFSGSADGTVKLWRRETRGKGTKHAAVQTLLKQECAVTALAVNMSGSIVYCGSSDGMVNFWEGEKQYAHGGVLKGHKLAVLCLQAAGNLVFSGSADKTICVWRRDGVIHTCLSVLTGHNGPVKCLAVEEDRESSSKGDQRWIVYSGSLDKSVKVWSVSEMAVDLNQMAMMQQQSQFSGSDADSIPSDGSFSSGRAGQNRRY | 475 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach3g02287 | 475 | PANTHER | F-BOX AND WD40 DOMAIN PROTEIN | 51 | 434 | IPR045182 | - | |
| Bach3g02287 | 475 | SUPERFAMILY | WD40 repeat-like | 107 | 434 | IPR036322 | GO:0005515 | |
| Bach3g02287 | 475 | SMART | WD40_4 | 340 | 377 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | SMART | WD40_4 | 98 | 135 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | SMART | WD40_4 | 136 | 173 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | SMART | WD40_4 | 382 | 430 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | SMART | WD40_4 | 208 | 247 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | SMART | WD40_4 | 297 | 336 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | SMART | WD40_4 | 250 | 288 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 257 | 287 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 347 | 376 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | FunFam | BnaA09g40460D protein | 296 | 459 | - | - | |
| Bach3g02287 | 475 | PRINTS | G protein beta WD-40 repeat signature | 417 | 431 | IPR020472 | - | |
| Bach3g02287 | 475 | PRINTS | G protein beta WD-40 repeat signature | 234 | 248 | IPR020472 | - | |
| Bach3g02287 | 475 | PRINTS | G protein beta WD-40 repeat signature | 275 | 289 | IPR020472 | - | |
| Bach3g02287 | 475 | Gene3D | - | 203 | 456 | IPR015943 | GO:0005515 | |
| Bach3g02287 | 475 | Gene3D | - | 89 | 202 | IPR015943 | GO:0005515 | |
| Bach3g02287 | 475 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 215 | 256 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | FunFam | BnaA09g28200D protein | 205 | 292 | - | - | |
| Bach3g02287 | 475 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 215 | 252 | - | - | |
| Bach3g02287 | 475 | MobiDBLite | consensus disorder prediction | 449 | 475 | - | - | |
| Bach3g02287 | 475 | Pfam | WD domain, G-beta repeat | 252 | 287 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | Pfam | WD domain, G-beta repeat | 218 | 246 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | Pfam | WD domain, G-beta repeat | 384 | 430 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | Pfam | WD domain, G-beta repeat | 345 | 376 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | Pfam | WD domain, G-beta repeat | 309 | 335 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | Pfam | WD domain, G-beta repeat | 109 | 135 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 304 | 336 | IPR001680 | GO:0005515 | |
| Bach3g02287 | 475 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 257 | 287 | - | - | |
| Bach3g02287 | 475 | CDD | WD40 | 109 | 430 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach3g02287 | Bach-Chr3 | 29607951 | 29609378 | Wgd |