Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02228 TTTGAGTCATCTGTCTATATAATTACTGAGCTGCCTAAGATCCAGTTATTCTCCATGGGAAGCATGAAGGTGCATCAGTTGGCACGTGGATTCTGGGAGCACGAACCCTCTCTCACGCTTGGTTGCAAGCGTTTACGCCCTCTTGCTCCCAAGCTTCCGAACACTCCCGAAACTCCTGTTGCAGCCTTCGATCTCAAGAGCTTCATCAGACCCGAAAGTGGCCCCATAAAATTGGGATCCTCATGCTCAGACCATAATAAGAAAGATTCAACACCACAAACCCAGCAGCAGCAGCAGGTGGAAACGCATCCAGGAGGGACACGGTGGAATCCGACGCAAGAACAGATAGGGATATTGGAGATGTTATACAGAGGTGGGATGAGAACTCCAAATGCTCAACAAATAGAGCAGATCACAGCTCAGCTTGGAAAATACGGCAAAATCGAAGGCAAGAATGTTTTCTATTGGTTCCAGAATCACAAAGCACGTGAAAGACAAAAGCAGAAGCGCAACAGTCTTGGCCTCAGTCATAGTCCACGAACTCCACCACCCATTACTACTATAACTTTGGAGACGTCAAGGGGGGAAGTGATCATAGAAAGAGTGGAAGATAGTCCGTACAAGAAGAAGTGTAGGAGCTGGGGATTTGAGTGCTTGGAAGAGCAAAGAAGGTCACCAAGTACTAAAGAAGAGGAACATAGAACTCTGGAGCTTTTCCCTTTGCACCCGGAAGGCAGATGA 741 0.4737 MGSMKVHQLARGFWEHEPSLTLGCKRLRPLAPKLPNTPETPVAAFDLKSFIRPESGPIKLGSSCSDHNKKDSTPQTQQQQQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPPPITTITLETSRGEVIIERVEDSPYKKKCRSWGFECLEEQRRSPSTKEEEHRTLELFPLHPEGR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02228 228 SMART HOX_1 86 153 IPR001356 GO:0003677
Bach3g02228 228 MobiDBLite consensus disorder prediction 154 168 - -
Bach3g02228 228 CDD homeodomain 89 150 IPR001356 GO:0003677
Bach3g02228 228 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 228 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Bach3g02228 228 MobiDBLite consensus disorder prediction 202 228 - -
Bach3g02228 228 MobiDBLite consensus disorder prediction 56 93 - -
Bach3g02228 228 SUPERFAMILY Homeodomain-like 85 155 IPR009057 -
Bach3g02228 228 FunFam WUSCHEL-related homeobox 4 88 155 - -
Bach3g02228 228 MobiDBLite consensus disorder prediction 67 93 - -
Bach3g02228 228 Gene3D - 69 157 - -
Bach3g02228 228 Pfam Homeodomain 89 148 IPR001356 GO:0003677
Bach3g02228 228 ProSiteProfiles 'Homeobox' domain profile. 84 149 IPR001356 GO:0003677
Bach3g02228 228 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02228 Bach-Chr3 29211487 29212437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02228 4 155 Wox Gene Family AT1G46480 63.473 2.33e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bach3g02228 Homeodomain 5.1e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02228 3 29211487 29212437 Bach3g02228 3 29211487 29212437 ECH