Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02227 ATATATACATAGTTGGTAGTTATACTCAAGATAGGCTAAGGCTAAGCTGTGATTAATATGGAAGAAAGAGATTGTTGTTCGATGACAACAAGCAGAAGCAGCCCAGAGAAGAGAAAGCAGCACCAAGATCTGAAGGCAACAGCAGCAAGGGAGAATAAAGATAAAGAGAAACCATACAGAGGGATAAGGATGAGAAAGTGGGGAAAGTGGGTGGCTGAGATTCGGGAACCAAACAAAAGATCAAGGATATGGCTTGGTTCTTACACCACTCCTGTCGCCGCCGCACGCGCTTATGATACCGCAGTTTTTTATCTGAGAGGACCTTCGGCTCGCCTTAACTTCCCGGAATTGTTATTCCAAGAAGACGGCCATTTCATCCAAGGTGAAGGCGCCGACATGACTGCCGATTCCATACGCAAGAAAGCCACCGAAGTCGGTGCCAGAGTTGATGCTCTCCAAACTGCTCTACCTGTCTCTTCCCAATCCAATTCCAGTTCCACCTCTTCCGAGAAACCTGACTTGAATGAGTATCCCCATCCCGAAGACTCCCTTGACAATTGAATGGAAGAAAGAGATTGTTGTTCGATGACAACAAGCAGAAGCAGCCCAGAGAAGAGAAAGCAGCACCAAGATCTGAAGGCAACAGCAGCAAGGGAGAATAAAGATAAAGAGAAACCATACAGAGGGATAAGGATGAGAAAGTGGGGAAAGTGGGTGGCTGAGATTCGGGAACCAAACAAAAGATCAAGGATATGGCTTGGTTCTTACACCACTCCTGTCGCCGCCGCACGCGCTTATGATACCGCAGTTTTTTATCTGAGAGGACCTTCGGCTCGCCTTAACTTCCCGGAATTGTTATTCCAAGAAGACGGCCATTTCATCCAAGGTGAAGGCGCCGACATGACTGCCGATTCCATACGCAAGAAAGCCACCGAAGTCGGTGCCAGAGTTGATGCTCTCCAAACTGCTCTACCTGTCTCTTCCCAATCCAATTCCAGTTCCACCTCTTCCGAGAAACCTGACTTGAATGAGTATCCCCATCCCGAAGACTCCCTTGACAATTGAAATTCAAAACACAATTATAATACAAGTTGAGGCAAGTCAAGCTGTTCAAAGCTCTACCCTCCTCTTTTTCTCTTTTTTCCCAGCTTCTTTTTATATAATTATAATTAAGCTAGATGCATAGTTTTTAGTGTTCTTTGTTTCTTAACCTTAATCTGCAAATAGGGCGAAAGACAATAGATACTAGGTTGCCATCCATGGTACCAGATTAATTGTTTCTGATGGCATCTGATCAAGTGTCGTTAGCT 1310 0.4519 MEERDCCSMTTSRSSPEKRKQHQDLKATAARENKDKEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQEDGHFIQGEGADMTADSIRKKATEVGARVDALQTALPVSSQSNSSSTSSEKPDLNEYPHPEDSLDN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02227 167 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Bach3g02227 167 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Bach3g02227 167 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Bach3g02227 167 Pfam AP2 domain 40 88 IPR001471 GO:0003700|GO:0006355
Bach3g02227 167 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 20 164 - -
Bach3g02227 167 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Bach3g02227 167 CDD AP2 40 98 IPR001471 GO:0003700|GO:0006355
Bach3g02227 167 MobiDBLite consensus disorder prediction 1 38 - -
Bach3g02227 167 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Bach3g02227 167 PRINTS Ethylene responsive element binding protein signature 78 98 IPR001471 GO:0003700|GO:0006355
Bach3g02227 167 MobiDBLite consensus disorder prediction 135 154 - -
Bach3g02227 167 MobiDBLite consensus disorder prediction 134 167 - -
Bach3g02227 167 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Bach3g02227 167 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02227 Bach-Chr3 29203155 29203960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02227 38 164 AP2-EREBP Transcription Factor Family AT2G23340 61.429 6.69e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach3g02227 AP2 2.7e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02227 3 29203155 29203960 Bach3g02227 3 29203155 29203960 ECH