Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02187 ATGGAACCTATTGGAGCTTTCCCTGATGGAGAGTGGGATTGCTTTCCTAGAATGTCTGCCGCTGAAGAGTTTGATTACTCACCACAATTTGTGGTTCATAGTTCATATCTGTTTGGGGAGGATGATGGATTGAACATTGGAACACAGCCCACATTTTGTTCTGCTTCTGAAGCTGGGGAGAATGAGAGTATGTTTTATTCTTTAGAAGCACTTAACTCCAATTTGCAGTATGTTTCTCACGAAAGTAATTACAGAAGTGATTGTCGTAATGGTACTGTACTCATAGCCAATCCGGGGCAACCAAACTTCTACTTGAATGATTCTGATCAATTCGCATCAAATAATGCCATTGTCTCCATGAACATTTGCATGATGGATGAGAAAAGCACCAGTTCGTTTGTCCCTTCGCTTACTGACATTGCGCTGGAAGAGACTTTCAACCTGATTGAAAATGGCAGCACTGAGAGATTGGAGAATTTTGATTACAGGGAAGCAGAACCTACTGTCATTCCTGCCAAACAGTTGCAGCAACTGAAAAGGAAGCTTGATGTGCCAGAACAGGTGGTGCCCGGAGAAGAGAAAGGAAAAGTCAACGCATCAGAGAATCAAAACAAGAAACCTCGTATATCAAGAGATGTGCAAAGATGCCAGAAAAATGCACGCCCAAAGAAGAACCGGAAGCTTACCCAAAATGGCAACGAGGAAGAAGAGACCAATGCAGGATCGGATGGACAGAGCTCTAGTAGTTACAGCTCAGAGGATGTTGATGCATCTCAGGAAAATAGTGGAGGCACGAGTTCAACTTCTAAATCACCTATGATTCTTAACGTAAATGGGAAGACAAGAGCCAGTAGGGGATCAGCAACAGATCCCCAAAGTCTTTATGCAAGGAAAAGAAGAGAGAGAATAAATGAACGACTACGAACCCTCCAGAATCTTGTCCCTAATGGAACTAAGGTTGATATAAGCACAATGCTTGAAGAGGCAGTGCACTACGTGAAGTTTTTGCAACTCCAGATTAAGCTCTTAAACTCTGATGATCTTTGGATGTACGCTCCAATTGCTTACAATGGAATCGATATAGGACTCAATCTCAACAGGAAGATATCTCCTCCACTTGGAGCTTAA 1128 0.4255 MEPIGAFPDGEWDCFPRMSAAEEFDYSPQFVVHSSYLFGEDDGLNIGTQPTFCSASEAGENESMFYSLEALNSNLQYVSHESNYRSDCRNGTVLIANPGQPNFYLNDSDQFASNNAIVSMNICMMDEKSTSSFVPSLTDIALEETFNLIENGSTERLENFDYREAEPTVIPAKQLQQLKRKLDVPEQVVPGEEKGKVNASENQNKKPRISRDVQRCQKNARPKKNRKLTQNGNEEEETNAGSDGQSSSSYSSEDVDASQENSGGTSSTSKSPMILNVNGKTRASRGSATDPQSLYARKRRERINERLRTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLNSDDLWMYAPIAYNGIDIGLNLNRKISPPLGA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02187 375 MobiDBLite consensus disorder prediction 186 296 - -
Bach3g02187 375 MobiDBLite consensus disorder prediction 198 219 - -
Bach3g02187 375 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 132 359 - -
Bach3g02187 375 Pfam Helix-loop-helix DNA-binding domain 297 337 IPR011598 GO:0046983
Bach3g02187 375 MobiDBLite consensus disorder prediction 234 291 - -
Bach3g02187 375 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 287 336 IPR011598 GO:0046983
Bach3g02187 375 SMART finulus 293 342 IPR011598 GO:0046983
Bach3g02187 375 FunFam Basic helix-loop-helix transcription factor 288 345 - -
Bach3g02187 375 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 287 351 IPR036638 GO:0046983
Bach3g02187 375 CDD bHLH_AtIND_like 288 350 - -
Bach3g02187 375 Gene3D - 286 344 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02187 Bach-Chr3 28935185 28936695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02187 189 363 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 55.676 4.04e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach3g02187 HLH 9.2e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02187 3 28935185 28936695 Bach3g02187 3 28935185 28936695 ECH